Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00724 ATGGAAATTGGAATGCTACCAATCTCTGCATCAAAGAGAGGAAAACTCTTAGCTGCTGGTTACACCACACTCCATTCCATTGCCGCCACTTCCATCACGAACCTTGCCACAGATATAGAAGTTTCTGAGAATGAAGCTTTGGAAATTCTGAATTTTGCTACAAGAACAAGTGCTTTGGAAAAAAGATCAAGTGGGAGTAACACTAATGTTATTCAAGGTGGTCAGAGTGCTTGGGATATGCTCAATGAGGAAAGGTTTTCTTCTTCCATTACCACCTCTTGTGTTGATCTAGATAACATCCTTGGCGGAGGGATTAATTGCAAAGAAGTCACTGAAATTGGTGGAGTTCCAGGCATCGGTAAAACACAGATAGGGATTCAACTTGCAGTAAATGTTCAGATTCCTCTAGACTATGGTGGCCTAGGTGGGAAGGCAATATACATTGATACAGAAGGAAGCTTTATGGTGGAACGTGTTCTTCAAATTGCTGAAGCATGCATAGAGGATATGTCAGAATATGGCCACCACTTCCACAAGGATAATCAAGCTTATGGAGTTAAAATGCACCCAAATAGTATCTTGGAAAATATATTCTATTTTCGTGTTTGCAGCTATACTGAACAAATTGCTTTGGTAAATTACTTGGACAAATTCGTCACGGAGCATAAAGATGTGAAGATCATCCTTATTGACAGTGTTACTTTCCACTTCCGCCAAGACTTTGAAGATATGGCTCTTCGGACTCGATTACTTGGTGAAATGTCTTTAAAGTTGATGAAACTTGCAAGAAATTTCTCTTTGGCTGTTGTTATGTTGAATCAAGTTACAACCAAGCATATTGATGGTTCATTTCAGTTGACACTTGCCCTAGGTGATAGCTGGTCGCATTCATGCACGAACCGGATCATCTTATATTGGAATGGCGATGAACGACATGCATACATTGACAAGTCTCCTTCTCTTAAATCAGCTTCAGCACCATATTCTGTGACTTCTAGGGGGATACGTAATACTACTTCAAGTAGTAAAAGAATCAAGATGGTGTGA 1047 0.3992 MEIGMLPISASKRGKLLAAGYTTLHSIAATSITNLATDIEVSENEALEILNFATRTSALEKRSSGSNTNVIQGGQSAWDMLNEERFSSSITTSCVDLDNILGGGINCKEVTEIGGVPGIGKTQIGIQLAVNVQIPLDYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDMSEYGHHFHKDNQAYGVKMHPNSILENIFYFRVCSYTEQIALVNYLDKFVTEHKDVKIILIDSVTFHFRQDFEDMALRTRLLGEMSLKLMKLARNFSLAVVMLNQVTTKHIDGSFQLTLALGDSWSHSCTNRIILYWNGDERHAYIDKSPSLKSASAPYSVTSRGIRNTTSSSKRIKMV 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00724 348 ProSiteProfiles RecA family profile 1. 86 275 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Trre7g00724 348 Gene3D - 70 339 IPR027417 -
Trre7g00724 348 PIRSF Rad51 1 341 IPR016467 -
Trre7g00724 348 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C 1 346 - -
Trre7g00724 348 FunFam DNA repair protein RAD51 73 339 - -
Trre7g00724 348 CDD Rad51C 108 319 - -
Trre7g00724 348 Pfam Rad51 75 337 IPR013632 -
Trre7g00724 348 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 336 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00724 Trre-Chr7 4747704 4752022 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00724 K10870 - qsu:112016681 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00724 7 4747704 4752022 Trre7g00724 7 4747704 4752022 ECH