Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00720 ATGTCTCAACTGAAGCAAATGTCGCACGCTGATAATAGTGCTCCGTCGACGCCGGGAAAGTTCAAGATGGAGAAAGCTTCTTACTTCAATCGTGTACGGTGGCACACTTCTCCGGCGAAGCTTTGTCTTTGGACTTTTGTTTTCTCAGCGGCGATCTTGATCTTCTTTTTCCGTTCTCCGGCGACTTCTCCTCTTCCGGCAGACCCTTCTCGTCGTTCACTGAGAAGTCCTTCCAACTGGGGTGGTCCTGTTTGGGAGAAACGTGTTCGTTCCTCCGCTAGAGTCCGGTCTAGAAACGGATTATCCGTTCTTGTGACCGGAGCTGCTGGTTTTGTCGGAACACATGTCTCGGCGGCGCTTAAGCGTCGCGGAGATGGTGTTCTTGGAATTGATAATTTCAATGACTATTATGACCCTTCTTTGAAGCGTGCACGCCAAGCACTATTGGAGAGAACTGGTGTTTACATTGTTGAAGGTGATATCAATGATGCTGCTTTGTTAAGGAAACTTTTTGAGGTTGTTCCTTTTACTCATGTTATGCATTTAGCTGCTCAAGCTGGTGTGAGGTATGCTATGGAAAATCCTGGTTCTTATGTTCATAGTAACATTGCTGGTTTTGTTAATTTGCTTGAAGTTTGTAAAAGTGTTAATCCTCAACCTTCAATTGTTTGGGCTAGTTCTAGTTCTGTTTATGGATTGAATACTAAGGTACCTTTTTCTGAAAGGGATAGAACTGATCAACCTGCTAGTTTGTATGCTGCTACTAAGAAAGCTGGTGAAGAAATTGCTCATACTTATAATCATATATATGGTCTTTCTTTAACTGGTTTGAGGTTTTTTACTGTTTATGGTCCTTGGGGTAGGCCTGATATGGCTTACTTTTTCTTTACTAGAGATATTTTGAAGGGGAAGACGATACCTATTTTTGAGGCAGCGAATCATGGTACCGTTGCTAGGGATTTTACTTATATTGATGATATTGTGAGGGGGTGTTTAGGTGCTTTGGATACTGCTGAGAAGAGTACTGGTAGTGGTGGGAAGAAGAGGGGGCCGGCACAGTTGAGGGTTTTCAATTTGGGGAATACCTCGCCTGTTCCTGTTACTGATCTTGTGAGTATTTTGGAGAGGTTGTTGAAGACTAAGGCGAAGAGGAATATTATGAAGTTGCCGAGGAATGGGGACGTGCAGTTTACTCATGCGAATATTAGCTATGCGCAGAGAGAGCTTGGTTATAAGCCTGGGACGGATCTGCAGACCGGTTTGAAGAAATTCGTGAGGTGGTACCTCAATTACTATGCTGGTGGGAAGAAAGCTGTTGAGTGA 1323 0.4384 MSQLKQMSHADNSAPSTPGKFKMEKASYFNRVRWHTSPAKLCLWTFVFSAAILIFFFRSPATSPLPADPSRRSLRSPSNWGGPVWEKRVRSSARVRSRNGLSVLVTGAAGFVGTHVSAALKRRGDGVLGIDNFNDYYDPSLKRARQALLERTGVYIVEGDINDAALLRKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTKVPFSERDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKTIPIFEAANHGTVARDFTYIDDIVRGCLGALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVTDLVSILERLLKTKAKRNIMKLPRNGDVQFTHANISYAQRELGYKPGTDLQTGLKKFVRWYLNYYAGGKKAVE 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00720 440 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 99 433 IPR036291 -
Trre7g00720 440 PRINTS Nucleotide sugar epimerase signature 319 334 - -
Trre7g00720 440 PRINTS Nucleotide sugar epimerase signature 394 411 - -
Trre7g00720 440 PRINTS Nucleotide sugar epimerase signature 354 369 - -
Trre7g00720 440 PRINTS Nucleotide sugar epimerase signature 129 145 - -
Trre7g00720 440 Pfam NAD dependent epimerase/dehydratase family 103 340 IPR001509 -
Trre7g00720 440 Gene3D - 102 434 - -
Trre7g00720 440 PANTHER EPIMERASE-RELATED 85 433 - -
Trre7g00720 440 FunFam UDP-glucuronate 4-epimerase 3 102 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00720 Trre-Chr7 4707013 4708335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00720 4 438 Miscellaneous Gene Families AT4G00110 86.667 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00720 K08679 - gmx:100788739 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00720 7 4707013 4708335 Trre7g00720 7 4707013 4708335 ECH