Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00719 ATGATGATGGCTGAGGATCTCGGTGTAGAAGCCAAGGAAGCATCTGTTCGTGAGGTTGCCAAGCTCTTACCTCTTCCGGAGCTTCTTCAGTCAATTTCATCGATCAAAGCCGATTACATTTCACGCCAACAGGCCAATGATGCACAGCTTAGTACAATGGTTGCAGAGCAGGTTGAGCAGTCACAGGCAGGATTGAAATCACTCTCCTTTTCTGAGAAGACAATAAACCAGCTTCGGGAAAACTTTCTCTCCATTGAGAATTTATGTCAGGAATGCCAAACATTAATTGACAACCATGACCAGATAAAGATACTTAGCAATGCAAGAAATAACTTAAACACAACCTTGAAGGATGTTGAAGGTATGATGTCCATCTCTGTTGAGGCAGCGGAGGCTCGGGATTCTTTGACTGATGACAAAGAAATTGTCAATACTTACGAGAGGTTAACAGCTCTAGATGGAAAGCGAAGATTTGCATTAGCAGCAGCAGCATCTCACAAGGAAGAGGTTGGAAGATTGAGAGAATATTTTGATGAAGTAGATCAAACCTGGGAGAACTTTGAGAAGACACTATGGGGACATGTTGCCAATTTCTATAAACTTTCTAAAGAAAGCCCACAGACTTTGGTTCGGGCTTTACGGGTTGTTGAAATGCAAGAAATTCTTGATCAACAGGTTGCAGAGGAAGTAGCTGAGGCTGAAGGGGATGGTGCATTGGCATCAGCCACAAATACTCATAGAAGTGGCATAAAATCTACAAGCACAATGGCTTCTTCGAAAAATTTAACACAACAAAAATTGAAAGTTCAGGGGAAAGGCTATAAGGATAAGTGCTACGAGCAAATTAGGAAGACTGTTGAAGGACGCTTCGACAAGCTTCTAAATGAGCTTGTGGTTGAGGACCTGAAAGCAGCTTTAGAGGAAGCTCGAGTGATTGGGGAAGAACTTGGCGATATCTATGATTATGTTGCCCCCTGCTTTCCTCCAAGATATGAAATATTCCAACTAATGGTGAATCTGTACACTGAGAGGTTTATTCAGATGCTAAGGTTGCTTAGTGACAGGGCAAATGAATTAACAAATATTGAGATATTAAAGGTAACTGGTTGGGTAGTTGAATACCAAGATAACCTGATTGGCCTCGGTGTTGACGAGTCTCTGGCCCAAGTGTGTTCCGAGAGTGGTGCAATGGATCCTCTTATGAATTCTTATGTTGAGCGAATGCAAGCTACAACAAGGAAATGGTACTTGAATATTTTAGAAGCAGATAAAACACAGCCCCCAAAGAAAACTGAAGATGGGAAGCTATACACCCCAGCTGCTGTTGATCTATTCAGGATACTTGGAGAGCAGGTTCAAATTGTGCGAGATAACAGCACTGATGTCATGTTATACCGAATTTCCTTGGCAACCATTCAGGTGATGATTGATTTTCAAGCAGCTGAAAAGAAGAGACTTCATGAACCAGCTTCTGAAATTGGTCTGGAACCTTTATGTGCTATGATAAACAATAATTTGCGCTGCTATGATCTTGCAATGGAGCTAAGTAATAGCACCATAGAAGCCCTTCCACAGAACTATGCAGAGCAGGTTAATTTTGAAGATACCTGTAAGGGGTTTCTCGAGGTTGCTAAGGAAGCTGTGCATCAAACTGTAAGTGTAATATTTGAAGATCCCGGTGTCCAGGAGTTATTGGTCAAACTATACCATAAAGAATGGAGTGAGGGGCAGGTTACTGAGTACTTGGTTGCAACATTTGGCGATTATTTTACTGATGTAAAAATGTACATTGAAGAAAGATCTTTTAGGAGATTTGTTGAAGCTTGCCTAGAGGAAACAGTGGTTGTTTATGTTGACCGTCTTTTAACACAGAAAAACTACATCAAGGAAGAAACTATTGAACGGATGAGGCTAGATGAGGAGGTCATCATGGACTTTTTTAGGGAACATATCAGTGTTTCTAAAGTTGAAAACAGAGTTAGCGTACTTAGCGACTTGAGGGAACTGGCTTCAGCAGAGAGCCTTGATACATTCACACTCATCTATACAAATATACTTGAACATCAACCTGACTGCCCGCCTGAAGTTGTTGAGAAACTTGTTGGTTTACGAGAAGGAATTCCTCGGAAGGATGCCAAGGAGGTCATACAAGAGTGCAAAGATATATATGAAAATTCTCTTATTGATGGAAGACCTCCAAAGACAGGTTTTGTTTTTCCTCGGGTGAAGTGCTTAACTGCTACCAAGGGTGGAATTTGGCGTAAACTCACTTGA 2274 0.4138 MMMAEDLGVEAKEASVREVAKLLPLPELLQSISSIKADYISRQQANDAQLSTMVAEQVEQSQAGLKSLSFSEKTINQLRENFLSIENLCQECQTLIDNHDQIKILSNARNNLNTTLKDVEGMMSISVEAAEARDSLTDDKEIVNTYERLTALDGKRRFALAAAASHKEEVGRLREYFDEVDQTWENFEKTLWGHVANFYKLSKESPQTLVRALRVVEMQEILDQQVAEEVAEAEGDGALASATNTHRSGIKSTSTMASSKNLTQQKLKVQGKGYKDKCYEQIRKTVEGRFDKLLNELVVEDLKAALEEARVIGEELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTRKWYLNILEADKTQPPKKTEDGKLYTPAAVDLFRILGEQVQIVRDNSTDVMLYRISLATIQVMIDFQAAEKKRLHEPASEIGLEPLCAMINNNLRCYDLAMELSNSTIEALPQNYAEQVNFEDTCKGFLEVAKEAVHQTVSVIFEDPGVQELLVKLYHKEWSEGQVTEYLVATFGDYFTDVKMYIEERSFRRFVEACLEETVVVYVDRLLTQKNYIKEETIERMRLDEEVIMDFFREHISVSKVENRVSVLSDLRELASAESLDTFTLIYTNILEHQPDCPPEVVEKLVGLREGIPRKDAKEVIQECKDIYENSLIDGRPPKTGFVFPRVKCLTATKGGIWRKLT 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00719 757 Gene3D - 569 735 IPR042532 -
Trre7g00719 757 Gene3D - 394 563 - -
Trre7g00719 757 FunFam Exocyst complex component SEC6 569 742 - -
Trre7g00719 757 FunFam Exocyst complex component SEC6 394 563 - -
Trre7g00719 757 Pfam Exocyst complex component Sec6 177 737 IPR010326 GO:0000145|GO:0006887
Trre7g00719 757 PANTHER EXOCYST COMPLEX COMPONENT SEC6-RELATED 2 744 IPR010326 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00719 Trre-Chr7 4684978 4700008 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00719 K06110 - gmx:100799529 1408.28