Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00624 ATGGCTAAAGAAGGACCCAATTGGGATGGATTGCTCAAATGGAGTATAGCAAACTCCGATGGAACTCGCCAACCTCGCAATTTAAGTGAGGAGGACCGGAAATGGTTTATGGAAGCGATGCAAGCACAGACTGTTGATGTTGTAAAACGTATGAAAGAGATTACACTTGTAATGAAGACTCCTGAGCAAGAACTGGAAAACCAAGGGGTTACCCCTGCAGATATTGAAGATATGTTGGATGAGTTGCAAGAGCACGTTGAATCAATTGATATGGCTAATGATCTCCACACAATTGGTGGGTTGGTTCCTCTTCTTGCCTACCTCAAGAACTCTCATGCTAACATTCGAGCTAAGGCAGCTGATGTTGTGACCACAATAGTCCAAAATAATCCCCGAAGTCAGCAACTTGTTATGGAAGCAAATGGCTTTGAACCACTTGTTTCTAATTTCAGTTCTGATCCTGATGTGAATGTTCGAGCTAAAGCGCTGGGTGCAATATCTTCACTAATTCGTCACAACAAACCTGGCGTCGCTGCATTTCGTCTAGCAAATGGTTATGCAGCCTTAAAAGATGCGTTGACCTCTGACAATGTTCGATTTCAAAGGAAGGCTCTCAACTTGATCCATTACTTATTGCTTGAGAATAGTTCAGACTGCAACATTGTGAAGGAACTAGGGCTCCATCGATTATTGATGCACCATGCTTCTAGTGAAGACGCAGATGTCCGTGAAGCTGCCCTCCGTGGCCTCCTTGAGCTTGCTCGCGATACAAAAGATAGCTCTGATGCCTCTTCAGAAGATAATGAGAAAATGAAGCAACTTCTTGAAGAACGAATAAACGGCATAAGTTTAATGTCAGCCGAGGATCTTGGAGCGGTAAGGGAGGAAAGACTGCTTGTGGACTCCCTTTGGAGTACATGCTTTGATGAGCCGTCCTCGCTTCAAGAGAAAGGTCTTCTTGTGCTTCCTGGAGAAGATGCACCTCCTCCTGATGTTGCTAGCAAACACTTTGAGCCTCCTCTTAGAGGCCATATTGGGAATCCCAATTCCAAGAAAGATTCAAACAATGAAAAGAAAGAGGCACCTTTACTTTTAGGGCCTTAA 1104 0.4411 MAKEGPNWDGLLKWSIANSDGTRQPRNLSEEDRKWFMEAMQAQTVDVVKRMKEITLVMKTPEQELENQGVTPADIEDMLDELQEHVESIDMANDLHTIGGLVPLLAYLKNSHANIRAKAADVVTTIVQNNPRSQQLVMEANGFEPLVSNFSSDPDVNVRAKALGAISSLIRHNKPGVAAFRLANGYAALKDALTSDNVRFQRKALNLIHYLLLENSSDCNIVKELGLHRLLMHHASSEDADVREAALRGLLELARDTKDSSDASSEDNEKMKQLLEERINGISLMSAEDLGAVREERLLVDSLWSTCFDEPSSLQEKGLLVLPGEDAPPPDVASKHFEPPLRGHIGNPNSKKDSNNEKKEAPLLLGP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00624 367 Coils Coil 75 95 - -
Trre7g00624 367 MobiDBLite consensus disorder prediction 321 367 - -
Trre7g00624 367 Pfam Nucleotide exchange factor Fes1 10 95 IPR013918 -
Trre7g00624 367 Gene3D - 43 316 IPR011989 -
Trre7g00624 367 SMART TOG_3 46 288 IPR034085 -
Trre7g00624 367 FunFam Hsp70-binding protein 1 43 315 - -
Trre7g00624 367 PANTHER PROTEIN FOLDING REGULATOR 4 307 - -
Trre7g00624 367 SMART arm_5 173 213 IPR000225 GO:0005515
Trre7g00624 367 SMART arm_5 215 255 IPR000225 GO:0005515
Trre7g00624 367 SMART arm_5 129 171 IPR000225 GO:0005515
Trre7g00624 367 SUPERFAMILY ARM repeat 51 277 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00624 Trre-Chr7 3972160 3975227 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00624 K09562 - gmx:100803376 612.453