Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00594 ATGGCAACTTCTGTTACAAATGTTGGAGCCATTAACATGGCACAGTTGAGATTGAATGGCTCTAGCAATGGAATACCTATGACAAGTTCAGCATTTTTTGGAAAAAGCCTTAAGAAAACCAGTTCATTGATGTCCAGCCAGAAGAGTTTGTCTGGTAATTTTAAGGTTTCTGCGCAGGTCGAATATGACGAGGAAAAGCAGACATCAAAGGACAGATGGGCTGGACTTGCTTATGATACCTCAGATGATCAGCAAGATATCACTAGAGGAAAGGGAAAGGTGGACAGTGTTTTCCAAGCTCCAATGGGATCTGGAACTCACTATGCTATCATGAGTTCCTATGATTATGTTAGTGCCGGCCTTCGCCAGTACGATATGGACAATACAATTGATGGCTTGTATATTGCACCAGCATTTATGGACAAGCTCGTTGTTCATATCACCAAGAACTATCTAAGCTTGCCAAGTGTTAAGGTTCCTCTCATTTTGGGAATTTGGGGAGGAAAAGGTCAAGGGAAGTCATTTCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAGCCCTATAATGATGAGTGCTGGAGAACTGGAAAGTGGAAATGCAGGAGAGCCTGCAAAGTTGATTAGGCAAAGGTACCGCGAGGCAGCCGACATTATCAAAAAAGGAAAGATGTGTTGTCTCTTCATCAACGATCTCGATGCAGGAGCTGGTAGACTTGGTGGTACTACTCAATACACAGTCAACAACCAGATGGTGAATGCAACCCTTATGAACATTGCTGACAACCCTACCAATGTTCAACTTCCTGGTATGTACAATAAGGAGGATAATCCTCGCGTCCCTATCATAGTCACTGGTAATGATTTCTCAACATTGTATGCTCCTTTAATTCGTGATGGACGTATGGAAAAATTCTACTGGGCGCCTACTCGTGAGGATCGGATCGGTGTCTGTCAAGGTATTTTCAGGTCAGATGGTGTCCCTAAGGATGACATTGTCAAGATTGTTGATGCATTCCCTGGACAGTCCATTGACTTTTTTGGTGCATTGAGGGCTAGAGTGTATGATGATGAAGTCAGGAATTGGATTTCTGGTATTGGTGTGGAGAGTATTGGGAAAAGGCTTGTGAATTCAAAGGAAGGACCTCCAACTTTTGAGCAACCAAAAATGACTATTGACAAGCTACTAGAGTATGGAAATATGCTTGTCCAAGAACAAGACAATGTAAAGAGAGTTCAGTTAGCTGATAAATATCTCAGCGAGGCAGCTCTTGGTGATGCAAATGATGATGCTATCAAGACTGGAAACTTCTATGGACAAGGAGCTCAACAAGTTAATTTTCCTGTCCAACAAGGTTGTGCTGACCCTTCTGCAGAAAACTATGATCCAACAGCCAGAAGTGACAATGGAAGCTGCACATATGAGTTGTAG 1431 0.427 MATSVTNVGAINMAQLRLNGSSNGIPMTSSAFFGKSLKKTSSLMSSQKSLSGNFKVSAQVEYDEEKQTSKDRWAGLAYDTSDDQQDITRGKGKVDSVFQAPMGSGTHYAIMSSYDYVSAGLRQYDMDNTIDGLYIAPAFMDKLVVHITKNYLSLPSVKVPLILGIWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCQGIFRSDGVPKDDIVKIVDAFPGQSIDFFGALRARVYDDEVRNWISGIGVESIGKRLVNSKEGPPTFEQPKMTIDKLLEYGNMLVQEQDNVKRVQLADKYLSEAALGDANDDAIKTGNFYGQGAQQVNFPVQQGCADPSAENYDPTARSDNGSCTYEL 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00594 476 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 125 309 - -
Trre7g00594 476 PANTHER - 26 474 IPR044960 -
Trre7g00594 476 MobiDBLite consensus disorder prediction 451 476 - -
Trre7g00594 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 334 IPR027417 -
Trre7g00594 476 Gene3D - 310 422 - -
Trre7g00594 476 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 310 422 - -
Trre7g00594 476 Gene3D - 125 309 IPR027417 -
Trre7g00594 476 MobiDBLite consensus disorder prediction 462 476 - -
Trre7g00594 476 Pfam ATPase family associated with various cellular activities (AAA) 165 306 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00594 Trre-Chr7 3798243 3801107 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00594 - - gmx:100795298 834.713