Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00576 ATGCCTGTAAGAGTAGCATTGGAGAACACCACAACCCCTTCTCACGTTTCAGGTGCAAATTCAAGGCGAAATTCATTTCAATCTTGTTCTCTTCTAAGTGTTGGACAGGCCTTTTCTGGCACGCAAAATGTTTCAAGCCTACAAAAGGATGAAGCATGGAGGGTAAATGTCCGTATACAAGGATGTGACCTTGAGCATGGATATCTATGCGGCACCATGGAAGCTCTTAATGTTCCTATGGCAGACACACCAGTAGTAACATTCTGGGAAGGGGAGATTGTTGATACCAAGAATTATACTTTCTTCACCGGAAAATGGGAGGCAGCACCCGAGGATGATATAAGGCACTGGACTAAGTTTGAATCTTTTGGCCCCCTATTGGGCCAAGTAGAGATGGATGGTGGAAAGTCTGCGGACCTAAGCAACTATCCTTACATATTCATGAGATGGAAGGAGCAGTATTTTGTGAATGTTGGAACTGACTGTGGGTTAACTATAGCTGGATTTTACTACGTTTGTTTCTCATGCAACGATGGCTCTATCAGTGGGTTCTATTACGATCCAAATAGCAGCCCATTTCAGAAGCTTGAGTTGAAAGCCACAAATGATGGAAGATCAGGTTTCTCTTTTTCATCATATGAGCTGCAATAG 651 0.4316 MPVRVALENTTTPSHVSGANSRRNSFQSCSLLSVGQAFSGTQNVSSLQKDEAWRVNVRIQGCDLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDTKNYTFFTGKWEAAPEDDIRHWTKFESFGPLLGQVEMDGGKSADLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCNDGSISGFYYDPNSSPFQKLELKATNDGRSGFSFSSYELQ 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00576 216 MobiDBLite consensus disorder prediction 1 21 - -
Trre7g00576 216 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 24 16 216 - -
Trre7g00576 216 MobiDBLite consensus disorder prediction 7 21 - -
Trre7g00576 216 Pfam Vacuolar import and degradation protein 32 200 IPR018618 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00576 Trre-Chr7 3662210 3665828 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00576 K23335 - gmx:100796349 410.223