Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00536 ATGCAACGAATCAAATTCTTCCAGATGGTTCCGTCATCATCATCGGTGGAAGAGGTTCAAATTCTGTTGAATTTTATCCTAAACGCAAAAACGGTGTCGTTTCGTTTCCTTTTCTTTCTGAAACTGAAGATACACAAATGGATAATCTATACCCTTACGTTCATCTTCTTCCTAACGGTTTATCCGGAGTTGATCGGTGGTCCGAGAAACTATCCGTCGGCGGGGAGTTCGGTTATGTTGGCTTTGGAAGGTGAATTTTCTGAGGCGGTGGTTGTTGTTTGCGGCGGTGCTCAATACGGTGCGTTTCTTGAACGGAATGTTGATACGCCGGCGCATGGGAGTTGTGGTCGGATAATGGCAACGGGATCCGACCCGGTTTGGGAAATGGAGGATATGCCGTTTCAGAGAATTATGGGTGATATGGTGATTTTACCAAACGGTGATGTTTTGATTATAAATGGAGCTATGAAAGGGACACAAGGTTTTGAATTGGGTTCAGATCCGTGTTTGAATCCGGTTTTATATCGACCCGATGAACCGGCTGGGTTACGGTTCATGGTTTTGAATCCGGGTACTGTACCGAGACTTTATCATTCAACGGCGAATTTGTTACCGGATGGAAGAGTTTTACTAGCGGGAAGTAACCCACATGTTTTTTATCGATTTGATGTTGAGTTTCCAACAGAGTTAAGAATCGAAGCATTTTCACCTGAGTATTTGGATCCGGATAAGATGAATATCCGACCCGAGATTTTGGAAGTGCCCGAAATGGTGTCCTATGGTGTGGGTTTTGATGTTGTTGTGAGTGTTGAGTTGCCTGTTGTGGGAATTATTGAAGTGAATTTGGGTAGTGCTCCTTTTGCAACTCATTCTTTTTCTCAAGGTCAACGGTTGGTCAAACTTGGGGTTGGTTCGGCTGTGCCGGAGGATGGTGGGAGATGGAGGATTAGATGTACGGCGCCGCCGAGTGGGATGGTTGCGCCGCCCGGGTATTATATGGTTTTTGCGGTTAATCAAGGTGTTTCAAGTGTCGCACGTTGGATACATGTGTCATAG 1056 0.4536 MQRIKFFQMVPSSSSVEEVQILLNFILNAKTVSFRFLFFLKLKIHKWIIYTLTFIFFLTVYPELIGGPRNYPSAGSSVMLALEGEFSEAVVVVCGGAQYGAFLERNVDTPAHGSCGRIMATGSDPVWEMEDMPFQRIMGDMVILPNGDVLIINGAMKGTQGFELGSDPCLNPVLYRPDEPAGLRFMVLNPGTVPRLYHSTANLLPDGRVLLAGSNPHVFYRFDVEFPTELRIEAFSPEYLDPDKMNIRPEILEVPEMVSYGVGFDVVVSVELPVVGIIEVNLGSAPFATHSFSQGQRLVKLGVGSAVPEDGGRWRIRCTAPPSGMVAPPGYYMVFAVNQGVSSVARWIHVS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00536 351 Gene3D Immunoglobulins 247 351 IPR013783 -
Trre7g00536 351 CDD E_set_GO_C 246 350 IPR015202 -
Trre7g00536 351 PANTHER SECRETED PROTEIN-RELATED 58 350 - -
Trre7g00536 351 Gene3D - 43 246 IPR037293 -
Trre7g00536 351 Pfam Galactose oxidase-like, Early set domain 248 350 IPR015202 -
Trre7g00536 351 SUPERFAMILY Galactose oxidase, central domain 67 241 IPR011043 -
Trre7g00536 351 SUPERFAMILY E set domains 246 350 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00536 Trre-Chr7 3362574 3363697 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00536 - - ahf:112748634 505.753