Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00492 ATGAGAATTACATTATTATTAGTTTCATTCCTTCTGTGCTACTACTACTGCATAGTATCTATCACTCATGCCTCTCCCAAATGTCTTTATGATCAACAATCTTTGTTGCTCCAATTCAAAAACAATCTCACATTTGATCCTAAATATTCCACCACACTAAAATTTTGGAATAATAGCACTGATTGCTGTTATTGGAATAGTGTTACATGTGACAATGAGGGACATGTTATTGGCCTCGACCTTTCCGATGAATATTTTACCTATGGTGGATTTAACAATTCAAGTAGCCTTTTTAGTCTCCGACATCTCCAAGAACTGTACTTGTCTTATACCAATTTCAATTCTTCCATTCCATCAGGATTCAGTAAGTTGGAGAAGTTAACTATATTAGATCTTTCTAACTCTCATTTTTATGGAACACTTTCTAATTCAATATCAAACCTCACACATCTTACCTACTTAGACCTTTCTCATAATGATTTGAGTGGTGCAATTCCTTCATCCCTTTTTACACTCCCATCATTGGAGAAGATTCACCTTGAATACAACCAGTTTAGTAAATTTGAAAAATTCATAAACGTGTCTTCCTATGATCATAATTCAATGTCAAACCTCACACACCTTACTCACCTAAACCTTGATCATAATGATTTAAGTGGTACAATTCCTTCGTGCCTTTTTACACTCCCATCATTGGTGGACATTCACCTCGAATACAACCAGTTTAGTAAATTTGACAAATTCATAAACGTATCTTCCTATGCGTTGGAAACCCTTGATCTAAGTAGAAATAACTTATCTGGTCCTTTTACAATGCCTATCTTTCAGCTCCATTCACTTTCTTACCTCGATCTTTCCTCTAACAGGTTGAATGGCTCACTGCAGCTAGATGAGCTTTTGGAATTTAGAAATTTAACTATATTGGACCTTTCATACAACAACATATCAATCAATGTGAATGATTCAAATGCTAATCAGACTTCCTTTCCCAATATTAAGATTCTAAATTTGGCATCCTGCAACTTAAAAACTTTCCCTAGATGCTTGATAAATCAATCAGCCTTGGAATCGCTAGACCTTTCAGATAACCAAATTCATGGAAAAATACCAAACTGGATTTGGGAACTACAACATCTTGAACTCCTTAATATTTCTCACAACTTTCTCACTGATTTTGAAGGTCCTTTGCAAAATATTACTTCCAGCCTGTACCTCATTGACCTTCATAATAACCAATTGCAGGGGTCAATACTTATTTTTCCTAAATCTGCTGTAATTTTGGACTACTCGAACAATAATTTTTCTGTTGTCCCACAAGATATTGGTAAATACCTGTCTTCCACAAAATTTCTCTTTCTTTCATATAATAATTTACATGGAAACATCCCCGATTCCATCTGCAATGCTTCAGAACTTCAAGTGCTTGATATTTCCTTCAACAACATTTCTGGAACAATTCCACCGTGTTTAATTACAATGACTAAAACCCTTGTAGCATTGAATTTGAGAAAGAACAATATAACAGGAAGTATACCAGATATGTTTCCAGTTTCTTGTAATGTAAGGACTTTGAACTTCAATGGAAATATCATACATGGGCCCATTCCCAATTCTCTTTCCCACTGCTCATCATTAAAGGTATTTGACATTGGATCAAATCACATTTTTGGTGACTTTCCATGTTTTCTGAAAAACATACCAACACTTAAAGTCTTAGTTTTGCGGAACAACAAATTTCATGGTTCAATAGAATGTTCACATTCACAAGCAAATATCGGTTGGACAATGATTCAAGTTTTGGACATTTCTTTAAATAATTTCAATGGAAAACTACCGGATAAATATTTCATAAACTGGGATAGAATGATGTATGATGATGTTGTATCAAACTATAGCCTCACACATGATAACATTATCTTCAGATCTGAAGTGATTAGCCTGGTGGTGGAGCCTAGTAAAGAATTTGAATATTATAGTTTGACTATTACAATTAAAGGTCAACAGATGGAGTTGGTTAATATTCTAAAAATTATTAGAGCCATTGATTTCTCCTCCAATTTTTTTGAAGGACCAATACCAAATTTGTTGATGCATTTCAAGGAACTTTATGTTCTCAACTTTTCAAACAATGCTTTCTCTGGCAAAATTCCATCAACAATTGGGAACCTAAAACAGCTAGAATCTTTGGATCTCTCGAATAACTCTTTGGTTGGTGAAATTCCTATGGAACTTGCAAGCTTGTCATTCCTTTCTTATTTGAACCTTTCCTTCAATCATTTGGTTGGAAAGATCCCAACAGGTACTCAACTTCAGTCATTTCAAGAATCTTCCTTTGAAGGAAATTATGGACTGTATGGTCCTCCCTTGACTGAAATACCAAAAAGGCCATTTGATCCGCAACCACAACCAGCACGTGGAAGGTTATCCTGTTCAATTGAATGGAGTTTTTTAAGTGTGGAGTTGGGATTTGTTTTTGGGATCGGAGTCATCATCGGTCCCATAATGTTTTGGAAGCAATGGAGGGTAAGGTATTGGAAACTTGTGGACAAAATTCTTTGTTGGATGTTTTCAAGGATGTATCTTGAATATGCAACAGATAGAGGAAAAACATACACAGTTTTAAGATGGTGA 2631 0.3493 MRITLLLVSFLLCYYYCIVSITHASPKCLYDQQSLLLQFKNNLTFDPKYSTTLKFWNNSTDCCYWNSVTCDNEGHVIGLDLSDEYFTYGGFNNSSSLFSLRHLQELYLSYTNFNSSIPSGFSKLEKLTILDLSNSHFYGTLSNSISNLTHLTYLDLSHNDLSGAIPSSLFTLPSLEKIHLEYNQFSKFEKFINVSSYDHNSMSNLTHLTHLNLDHNDLSGTIPSCLFTLPSLVDIHLEYNQFSKFDKFINVSSYALETLDLSRNNLSGPFTMPIFQLHSLSYLDLSSNRLNGSLQLDELLEFRNLTILDLSYNNISINVNDSNANQTSFPNIKILNLASCNLKTFPRCLINQSALESLDLSDNQIHGKIPNWIWELQHLELLNISHNFLTDFEGPLQNITSSLYLIDLHNNQLQGSILIFPKSAVILDYSNNNFSVVPQDIGKYLSSTKFLFLSYNNLHGNIPDSICNASELQVLDISFNNISGTIPPCLITMTKTLVALNLRKNNITGSIPDMFPVSCNVRTLNFNGNIIHGPIPNSLSHCSSLKVFDIGSNHIFGDFPCFLKNIPTLKVLVLRNNKFHGSIECSHSQANIGWTMIQVLDISLNNFNGKLPDKYFINWDRMMYDDVVSNYSLTHDNIIFRSEVISLVVEPSKEFEYYSLTITIKGQQMELVNILKIIRAIDFSSNFFEGPIPNLLMHFKELYVLNFSNNAFSGKIPSTIGNLKQLESLDLSNNSLVGEIPMELASLSFLSYLNLSFNHLVGKIPTGTQLQSFQESSFEGNYGLYGPPLTEIPKRPFDPQPQPARGRLSCSIEWSFLSVELGFVFGIGVIIGPIMFWKQWRVRYWKLVDKILCWMFSRMYLEYATDRGKTYTVLRW 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00492 876 PRINTS Leucine-rich repeat signature 723 736 - -
Trre7g00492 876 PRINTS Leucine-rich repeat signature 151 164 - -
Trre7g00492 876 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 669 791 - -
Trre7g00492 876 SUPERFAMILY L domain-like 41 415 - -
Trre7g00492 876 Pfam Leucine Rich repeat 303 316 IPR001611 GO:0005515
Trre7g00492 876 Pfam Leucine Rich repeat 205 220 IPR001611 GO:0005515
Trre7g00492 876 Pfam Leucine rich repeat 144 185 IPR001611 GO:0005515
Trre7g00492 876 Pfam Leucine rich repeat 330 387 IPR001611 GO:0005515
Trre7g00492 876 Pfam Leucine rich repeat 427 482 IPR001611 GO:0005515
Trre7g00492 876 Pfam Leucine rich repeat 701 760 IPR001611 GO:0005515
Trre7g00492 876 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 157 791 IPR046956 -
Trre7g00492 876 Gene3D Ribonuclease Inhibitor 196 247 IPR032675 -
Trre7g00492 876 Gene3D Ribonuclease Inhibitor 248 324 IPR032675 -
Trre7g00492 876 FunFam Nuclear pore complex protein NUP107 30 189 - -
Trre7g00492 876 Gene3D Ribonuclease Inhibitor 325 422 IPR032675 -
Trre7g00492 876 SMART LRR_typ_2 205 229 IPR003591 -
Trre7g00492 876 SMART LRR_typ_2 148 172 IPR003591 -
Trre7g00492 876 SMART LRR_typ_2 100 123 IPR003591 -
Trre7g00492 876 SMART LRR_typ_2 302 325 IPR003591 -
Trre7g00492 876 SMART LRR_typ_2 376 398 IPR003591 -
Trre7g00492 876 SMART LRR_typ_2 723 751 IPR003591 -
Trre7g00492 876 SMART LRR_typ_2 329 352 IPR003591 -
Trre7g00492 876 Gene3D Ribonuclease Inhibitor 27 195 IPR032675 -
Trre7g00492 876 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Trre7g00492 876 Gene3D Ribonuclease Inhibitor 423 796 IPR032675 -
Trre7g00492 876 SUPERFAMILY L domain-like 419 789 - -
Trre7g00492 876 FunFam Tyrosine-sulfated glycopeptide receptor 1 244 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00492 Trre-Chr7 3079534 3082164 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00492 28 861 Receptor kinase-like Gene Family AT3G05660 35.016 4.36e-136 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00492 - - tpra:123922036 1066.99