Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00452 ATGGTGGGACCACTTAGACCTCAAATTGTATTGTTTGGTTCTTCAATTGTTCAACTTAGTTATAGTGATGATGGTTGGGGATCTATTCTTACTAACTTGTATTCTCGCAAGGCGGATATAATTTTGAGAGGATACTGTGGTTGGAATTCAAGGCGTGCTGTGCAGGTTCTGGATACAATTTTTCCCAAGAATGCAGCTGAGCAACCATCATTGGTTATTGTGTACTTTGGTGGCAATGATTCTATTCATCCACATCCATCTGGCCTTGGTCCTCATGTACCCCTTGAAGAATACATAGAAAATATGAGGAAGATTGTTAACCATCTTAAGAGCCTGTCGAAGAAGACTCGCATAATATTGCTCAGCTCTCCTCCAGTCAATGAGGCACAAATTCATGAATCATTCAGTAATATATTGGGGCCATTAAAGAGGACAAATGAATCATGTAGACTTTATTCAGAAGCATGTTTGGAGTTGTGCCATGAGATGAATGTCAAGGCCATTGACCTCTGGTCTGCACTTCAGCAAAGGGAGGACTGGTCAGATGTTTGCTTCACGGATGGAATTCATTTGTCACATGAGGGGAGCAAGATAGTGGCGAAGGAGATATTGAAGGTACTTGAAAGCACAAATTGGGAACCAAGTCTACACTGGAAATCAATGCCAAATGAGTTTGCAGAAGATTCACTATATGATCCAGTGGCTGTAGATGAAAAAACTACTGTAAATGTGTCCAACTGGAGTTTCCAGAAAAACTCTGACTGGGAAAGAGATTTGTGCATTTCCAAGCCATTGAATGGTCATTAG 807 0.4089 MVGPLRPQIVLFGSSIVQLSYSDDGWGSILTNLYSRKADIILRGYCGWNSRRAVQVLDTIFPKNAAEQPSLVIVYFGGNDSIHPHPSGLGPHVPLEEYIENMRKIVNHLKSLSKKTRIILLSSPPVNEAQIHESFSNILGPLKRTNESCRLYSEACLELCHEMNVKAIDLWSALQQREDWSDVCFTDGIHLSHEGSKIVAKEILKVLESTNWEPSLHWKSMPNEFAEDSLYDPVAVDEKTTVNVSNWSFQKNSDWERDLCISKPLNGH 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00452 268 Coils Coil 95 115 - -
Trre7g00452 268 Gene3D SGNH hydrolase 6 238 IPR036514 -
Trre7g00452 268 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 4 256 IPR045136 -
Trre7g00452 268 SUPERFAMILY SGNH hydrolase 6 207 - -
Trre7g00452 268 Pfam GDSL-like Lipase/Acylhydrolase family 11 197 IPR013830 -
Trre7g00452 268 FunFam isoamyl acetate-hydrolyzing esterase 1 homolog 6 238 - -
Trre7g00452 268 CDD Isoamyl_acetate_hydrolase_like 8 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00452 Trre-Chr7 2829536 2832646 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00452 K23978 - gmx:100796467 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g01645 13 13488966 13492525 Trre7g00452 7 2829536 2832646 PCT