Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00448 ATGGTTGGAAAAGCCATGACTGTGACTTCGCGCGAAAAGCTCGCAAGTCTCGTGCATTCAGCCAAATTGGCCATTGATATACCTTCAAAGCTTGAATTATTGCGTAAATTGAAGATTGAACTTCCTCGGGAAGATCCTGTTATTCTCACTGAGTTCCTCCCTCCGCTTTTCGACTTTCTCTCCGATCGTTTCAGTCCTGTCCGCAAATTCGTCACTGAGATGGTTGGTGAAATTGGATTGAATAACACTGAATTCATGCCTGATATTGTGCCTGTGTTGATTGATATCTTGGATGATGATACGCCAGCTGTTGTCCGCCAAGCTATACTGTGTGGAATTGATTTGTTTAGTTCCACACTTGAGAAAATCGCGATTCAGGGTCTATATTCTAGTGAGTTAGACAGCGCAGTTGAATCTGCATGGGAGTGGATGCTTAAATTCAAAGACAAAGTATACTCAATAGCATTTCAAAATGGAAGGGGTGGAGCAAAGCTGCTGGCACTGAAGTTTGTTGAAGCAGTTATTCGCCTTTACACACTTGATCCTAATGGTTCTACAGAACCCACTTCTCATCAAGGAAAACCACCAGTATTTAATATATCATGGCTGAGGCGGGATCATCCTGCACTTAACATTGGAGATTTGTCAATGGAAGCTAGTAATAGTTTAGGTCTCTTGCTTGATCAACTCAGGTTTCCAACTGTGAAGTCTCTTAGTAACTCAGTAATCATTGTGCTAATTAAAAGCCTTTCAGCCATCGCAATAGACAGGCCTGCATTCTATGGCCGCATCTTGCCAGTTTTGCTCAGTTTGGAACCCTCCAGCTCTGTTGTTAATGGGGTCTGTGTGTCTGCAGCGCATCTTGCTCTTAAGAAGGCCTTTCTTACATGCACGAAATGTACACATCCAAGCGCTGCCCCGTGGAGAGATCGTTTGGCTGGTGCCCTGAAGGAGATGCAGTCTGAAGGGAAGGCAGATCAGGTGTTCCATCCAATCTCTGCAAGTAATGGAAATATATTGCCGAGAGAGGAGGATTATCACCCAGTTATCAAGGAAGAGGATGCTTCAGTAAGTTCGTTTGATTCAGGGCACATTAATTTGGGAAGAAAACGATCAGGATCACAAAATGGTGGTGATTTAGCTGAAGATGCAGATGTTCCTGGAAAACGTGTTAGAACAACAACCGACGTTTTGAAAAAACCTAAAAAGGAGTTAGATGAAAGTACTGCTAACATACAGGCTGACACTCCTTCGTCTGTACCAGCATCTTCAAAAGGAGGAGATGTGGATAATGGGCCTGTACAGCAGCTTGTTGCCATGTTTGGTGCTTTGGTTGCTCAAGGTGAAAAGGCTGTTGCATCTTTGGAAATTCTTATCTCAAGTATTTCTGCTGACTTACTAGCTGAGGTGGTGATGGCAAATATGCGTTATCTACCTCCAAATTGCCCTAATGCTGAAGGAAATGATGAACAATTGCATGACATTAGTATATTTGGTTCCCATGACAAGGCTAAATATCCACAATCATTTGTGGCTGGTGTTATGTCACTTTCTAGTACTTTCCCGCCTGTTGCTTCACTTCTTGATGCTCATCAATCAGTGTCCAATGATTTAGTGAAGTCTCACGGGGAGGAAGAAATTTCTTCACCTGGAGTAGATAGCAGTGTTATGCATTCTGGCATGATTCTTTCATCTCAAAATGCACCATCACCTACTGATTTTCCATCTTCGGATACTTGTATACCTGGAGTGGAGAATGTCAGCACACCTCTGCCTGACATAGATGATGTTGGCAACTTAGAGAGTGGAATCCCTGGCCTGGATTCTTTTGGTCGAATTGATGCACCATCAGCAACTTTGGCTCCTTCATTGGCTTCAACTGATATGCAAATAGAAGATTCCAGTCAAGAGCAAGTTACGAGTTTGGATAATAGGTCACCATTGAACTCAGTTCCATCAGTATCAGCAGATAAATCTGAAGAGCTGAGCCCAAAAGCAGTTGCTACAGATGTCAATAGCTTGGTGTCCTCAACAGCTACTTCAGTTGTGTTGCCTTCTCGTCTAGTCTTGCCAAAGATGATTGCTCCAGTTGTTGATCTTGCAGATGAACAAAAGGATCATTTGCAAATATCATGTTTTATGCGTATCATTGATGCATATAAGCAAATATCTCTAGCTGGAGGCTCAAAAGTTCGATTTTCGATACTTGCTTATTTAGGTGTCGAGTTTCCTTTGGAATTAGACCCGTGGAAATTGTTACAAAAGCATATTTTGATTGATTACTCTAGTCATGAGGGACATGAGTTGACATTGCGTGTCCTCTACAGGTTATTTGGTGAGGCTGAAGTGGAGCCTGACTTCTTTTCTTCCTCAACTGCAGCTTCTGTATATGAGACATTCCTCCTAACAGTGGCAGAAGCACTTAGAGATTCTTTTCCACCTTCAGATAAATCATTAAGCAAACTGCTCGGTGAATCTCCTTATTTACCAAAATCAGTTTTGAAAATTTTAGAGAACATGTGTTCTCCTGGAAATGGGGATAAAGCTCAAAATGAATCACACACATTGAATGCGGATAGAGTCACTCAAGGTCTAAGTGCTGTATGGAGTTTGATTCTTCTAAGGCCTCCTATTCGAGATGCTTGTTTAAAAATTGCTTTACAGAGTGCAGTGCATCACTTGGAAGAAGTGCGCATGAAAGCAATACGCCTGGTAGCAAATAAACTTTATCCTTTATCACCAATTTCTAAACAAATAGAAGATTTTGCAAAGGAAATGTTGATCTCAGTGATGAGTAGTGATGCTTCTGAAACTACTGATGCTGAAGGGTCCAATGCTGATTCACAGAAGGGCCCTGATATTGAAAAGCTTACAAATGAACCAGTGTCTTTGAGTGGCAGTACTAAGGATGTCTCAGATAATCGGCAATTAAGCACATCTGAAGGCACCTCATCACTTTCAGTTTCTGAGGCTCAGAGGGGCATGTCACTGTATTTTGCCTTGTGCACAAAGAAACACTCTCTCTTTCGCGAAATATTTGTCATCTATAGAAGCACATCAAAAGCAGCAAAGCAGGCTATTCATCGTCAGATTCCCATACTAGTGCGCACATTGGGTTCATCCTCACATCTCCTTGAAATTATATCGGATCCCCCAAATGGAAGTGAGAATCTCCTAATGCAGGTGTTGCATACACTCACTGATGGTACGATCCCGTCAAAGGATTTAATATTTACTGTGAAAAGGTTACATGATTCAAAACTTAAGGATGCAGAGGTTCTTATTCCAATATTGCCATTCCTACCGAAAGATGAGGTAATGCCGGTTTTTCCCAACATTGTTAACCTGCCTTCGGAGAAGTTCCAAGGAGCGCTTGGTCGTATATTGCAGGGATCATCACAATCTGGTCCAGTGCTTACACCAGCTGAAGTATTAATTGCTATTCATGGAATTGATCCTGAAAGAGATGGAATTCCCTTAAAAAAGGTAACTGATGCATGCAATGCTTGCTTTGAGAAACGACAAACTTTTACTCAAGAAGTTCTGGCCAAAGTTTTGAATCAATTGGTTGAGCAAATTCCTCTTCCTTTACTGTTCATGCGGACAGTATTACAAGCAATAGGTGCTTTTCCGACACTGGTGGACTTTATCATGGGTATTCTTGCTCGCCTTGTGAAGAAACAGATATGGAAGTACCCAAAGTTGTGGGTAGGATTCTTGAAGTGTTTACAATTGACGAAACCACAATCATTTGGTGTTTTGCTTCAGCTACCTCCACCACAACTAGAAGCTGCATTAAATAGAATTGCTGCACTGAAGGCACCATTGATTGCTCATGCTAGCCAGCCAGATATACAATCGTCACTTCCCAGATCTGTGCTGGTTGTTCTTGGCATTGTTTCAGATTCTCAGATTGCAAGTCAGCCACAAACCAGCCAAACACAAACTAGCCAGCCACAAACTAGCCAGCCACAAACTAGTCAAACACAAACTAGCCAAACACAAACAGGTGAGACGAGCAACTCAGATAAGGACACGATGACAGAAAAATCCAAAGAATCGTCTACAGCGAGCTAA 4077 0.4204 MVGKAMTVTSREKLASLVHSAKLAIDIPSKLELLRKLKIELPREDPVILTEFLPPLFDFLSDRFSPVRKFVTEMVGEIGLNNTEFMPDIVPVLIDILDDDTPAVVRQAILCGIDLFSSTLEKIAIQGLYSSELDSAVESAWEWMLKFKDKVYSIAFQNGRGGAKLLALKFVEAVIRLYTLDPNGSTEPTSHQGKPPVFNISWLRRDHPALNIGDLSMEASNSLGLLLDQLRFPTVKSLSNSVIIVLIKSLSAIAIDRPAFYGRILPVLLSLEPSSSVVNGVCVSAAHLALKKAFLTCTKCTHPSAAPWRDRLAGALKEMQSEGKADQVFHPISASNGNILPREEDYHPVIKEEDASVSSFDSGHINLGRKRSGSQNGGDLAEDADVPGKRVRTTTDVLKKPKKELDESTANIQADTPSSVPASSKGGDVDNGPVQQLVAMFGALVAQGEKAVASLEILISSISADLLAEVVMANMRYLPPNCPNAEGNDEQLHDISIFGSHDKAKYPQSFVAGVMSLSSTFPPVASLLDAHQSVSNDLVKSHGEEEISSPGVDSSVMHSGMILSSQNAPSPTDFPSSDTCIPGVENVSTPLPDIDDVGNLESGIPGLDSFGRIDAPSATLAPSLASTDMQIEDSSQEQVTSLDNRSPLNSVPSVSADKSEELSPKAVATDVNSLVSSTATSVVLPSRLVLPKMIAPVVDLADEQKDHLQISCFMRIIDAYKQISLAGGSKVRFSILAYLGVEFPLELDPWKLLQKHILIDYSSHEGHELTLRVLYRLFGEAEVEPDFFSSSTAASVYETFLLTVAEALRDSFPPSDKSLSKLLGESPYLPKSVLKILENMCSPGNGDKAQNESHTLNADRVTQGLSAVWSLILLRPPIRDACLKIALQSAVHHLEEVRMKAIRLVANKLYPLSPISKQIEDFAKEMLISVMSSDASETTDAEGSNADSQKGPDIEKLTNEPVSLSGSTKDVSDNRQLSTSEGTSSLSVSEAQRGMSLYFALCTKKHSLFREIFVIYRSTSKAAKQAIHRQIPILVRTLGSSSHLLEIISDPPNGSENLLMQVLHTLTDGTIPSKDLIFTVKRLHDSKLKDAEVLIPILPFLPKDEVMPVFPNIVNLPSEKFQGALGRILQGSSQSGPVLTPAEVLIAIHGIDPERDGIPLKKVTDACNACFEKRQTFTQEVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPTLVDFIMGILARLVKKQIWKYPKLWVGFLKCLQLTKPQSFGVLLQLPPPQLEAALNRIAALKAPLIAHASQPDIQSSLPRSVLVVLGIVSDSQIASQPQTSQTQTSQPQTSQPQTSQTQTSQTQTGETSNSDKDTMTEKSKESSTAS 1358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00448 1358 SUPERFAMILY ARM repeat 47 928 IPR016024 -
Trre7g00448 1358 MobiDBLite consensus disorder prediction 383 409 - -
Trre7g00448 1358 Pfam Symplekin tight junction protein C terminal 1090 1268 IPR022075 -
Trre7g00448 1358 Pfam Symplekin/PTA1 N-terminal 102 320 IPR032460 -
Trre7g00448 1358 Gene3D - 2 333 IPR011989 -
Trre7g00448 1358 MobiDBLite consensus disorder prediction 410 425 - -
Trre7g00448 1358 MobiDBLite consensus disorder prediction 1307 1358 - -
Trre7g00448 1358 MobiDBLite consensus disorder prediction 933 986 - -
Trre7g00448 1358 MobiDBLite consensus disorder prediction 960 986 - -
Trre7g00448 1358 MobiDBLite consensus disorder prediction 629 662 - -
Trre7g00448 1358 MobiDBLite consensus disorder prediction 629 657 - -
Trre7g00448 1358 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1326 - -
Trre7g00448 1358 SUPERFAMILY ARM repeat 47 321 IPR016024 -
Trre7g00448 1358 MobiDBLite consensus disorder prediction 1307 1342 - -
Trre7g00448 1358 MobiDBLite consensus disorder prediction 360 429 - -
Trre7g00448 1358 ProSiteProfiles HEAT repeat profile. 89 128 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00448 Trre-Chr7 2787101 2799422 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00448 K06100 - gmx:100779360 2031.91