Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00335 ATGATCGCCGGAGCTTATAATAAAACACTCCGGCGTATCGATTTATCGCGGTCGAGGTTTTTTACGGGGAATGGGATATTGAATATGGCAGTTAGTTGTGTGAATTTGGTTGAGCTTGATTTGTCGAATGCGACGGAGTTGAGAGATGCGGCTATGGTTGGTGTTGCACGCGCTGTGAATTTGGAGAAACTTTGGTTGAATAGGTGTAAGTTGGTTACTGATATGGGAATTGGGTGTATTGCTGTTGGTTGTAGGAAATTGAAGTTGATTAGCTTGAAATGGTGTGTTGGTGTTGCTGATTTAGGTGTTGATTTAATTGCTATTAAGTGTAAACAACTTTCTTCTATGGATCTCTCTTATTTGCCTATCACTGAGAAATGTCTCTCCTCGATCTTCAAATTGCAACATCTCGAAGATTTGGTCCTTGAAGGATGCTTTGGCGTTGGGGACGACAGCCTCAACAATTTAGTATTCAACCAAGGATGCAAGACATTAAAGAAACTTGATATCTCAGGCTGTCAAAACATAAGTCATATCGGTCTGTCAAAGCTAACGAGCATTTCTGGATGTGTCGAACAACTTGTATTAGCAGATGGTTCTCCGGTGACTCTTGCTTTTGCTGATAGTTTGAGTAAACTTTCAATGTTGCAATCGATCACATTAGATGGCTGCATTATTACCTCTGATGGATTGAAAGCCATTGGAAATTTGGGTATTTCGCTGAAGGAACTGAGTTTAAGCAAGTGTTCGGGAGTGACGGATGAAGCTCTTTCTTTCCTTGTGTCAAAACACAGAGATTTAAGGAAACTTGACATCACATGCTGCCGCAAAATAACCGATGTTTCGATTGCTAGCATTGCGAATTCGTGTAGAAGTCTCACTTCTCTCAAAATGGAATCGTGTACGCTAGTTTCATCAGAAGCGTATATATTGATTGGACAGAAATGCCATTATCTTGAGGAGCTTGATCTCACAGATAATGAAATTGATGATGAAGGCCTAGAGTCCATATCTCGTTGTTCGAGGCTCTTCAGCCTGAAACTAGGAATCTGCCTGAACATAACTGATAGAGGAGTTGCCTATGTTGGCATGTGTTGCTCAAAGTTAAAGGAGCTTGATCTATACAGGTGCACAGGAGTAACAGATTTGGGAATCTCAGCAATTGCTTCTGGTTGCCCTGACCTAGAGATGATAAATACCGCATATTGCACTAGCATTACAGATAGGGCATTATTCTGCTTATCAAAATGTGCAAATTTGCAGACACTCGAAATTCGAGGTTGTCTTCTTGTTACATCTATAGGTTTAGCATCTATTTCAATGAATTGCAAACAACTGAGCCGCCTAGACATAAAAAAGTGTTACAATATTGACGATAGTGGTATGATTCCACTAGCTCATTTCTCCCAAAATTTAAGACAGATAAACTTGTCGTATAGCTCAGTTACAGATGTAGGGCTTCTTTCACTTGCCGGTATCAGTTGCCTTCAAAACTTTACCCTACTTCACCTGCAAGGCTTGTCCCCACAAGGACTAGCGGCGGCGTTATTGGCATGTGGAGGGCTAACGAAAGCAAAGCTTCATGTTAAACTACGATCTCTTTTACCCGAGCTGCTCATCAGACATATAGAAGCACGTGGGTGCGTGTTTGAGTGGAGAGATAAAGTGTTTCAGGCTGAATTGGACCCCAAGTGTTGGAAATTACAGTTAGAAGATCTGATTCAATAG 1728 0.412 MIAGAYNKTLRRIDLSRSRFFTGNGILNMAVSCVNLVELDLSNATELRDAAMVGVARAVNLEKLWLNRCKLVTDMGIGCIAVGCRKLKLISLKWCVGVADLGVDLIAIKCKQLSSMDLSYLPITEKCLSSIFKLQHLEDLVLEGCFGVGDDSLNNLVFNQGCKTLKKLDISGCQNISHIGLSKLTSISGCVEQLVLADGSPVTLAFADSLSKLSMLQSITLDGCIITSDGLKAIGNLGISLKELSLSKCSGVTDEALSFLVSKHRDLRKLDITCCRKITDVSIASIANSCRSLTSLKMESCTLVSSEAYILIGQKCHYLEELDLTDNEIDDEGLESISRCSRLFSLKLGICLNITDRGVAYVGMCCSKLKELDLYRCTGVTDLGISAIASGCPDLEMINTAYCTSITDRALFCLSKCANLQTLEIRGCLLVTSIGLASISMNCKQLSRLDIKKCYNIDDSGMIPLAHFSQNLRQINLSYSSVTDVGLLSLAGISCLQNFTLLHLQGLSPQGLAAALLACGGLTKAKLHVKLRSLLPELLIRHIEARGCVFEWRDKVFQAELDPKCWKLQLEDLIQ 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00335 575 PANTHER UNCHARACTERIZED 351 529 - -
Trre7g00335 575 SUPERFAMILY RNI-like 366 507 - -
Trre7g00335 575 Gene3D Ribonuclease Inhibitor 199 310 IPR032675 -
Trre7g00335 575 Gene3D Ribonuclease Inhibitor 107 198 IPR032675 -
Trre7g00335 575 Gene3D Ribonuclease Inhibitor 3 106 IPR032675 -
Trre7g00335 575 SMART LRR_CC_2 162 187 IPR006553 -
Trre7g00335 575 SMART LRR_CC_2 290 315 IPR006553 -
Trre7g00335 575 SMART LRR_CC_2 33 58 IPR006553 -
Trre7g00335 575 SMART LRR_CC_2 366 391 IPR006553 -
Trre7g00335 575 SMART LRR_CC_2 316 340 IPR006553 -
Trre7g00335 575 SMART LRR_CC_2 7 32 IPR006553 -
Trre7g00335 575 SMART LRR_CC_2 392 417 IPR006553 -
Trre7g00335 575 SMART LRR_CC_2 213 237 IPR006553 -
Trre7g00335 575 SMART LRR_CC_2 238 263 IPR006553 -
Trre7g00335 575 SMART LRR_CC_2 60 83 IPR006553 -
Trre7g00335 575 SMART LRR_CC_2 341 365 IPR006553 -
Trre7g00335 575 SMART LRR_CC_2 264 289 IPR006553 -
Trre7g00335 575 SMART LRR_CC_2 84 109 IPR006553 -
Trre7g00335 575 SMART LRR_CC_2 443 468 IPR006553 -
Trre7g00335 575 SMART LRR_CC_2 469 493 IPR006553 -
Trre7g00335 575 SMART LRR_CC_2 418 442 IPR006553 -
Trre7g00335 575 SMART LRR_CC_2 134 159 IPR006553 -
Trre7g00335 575 Gene3D Ribonuclease Inhibitor 311 560 IPR032675 -
Trre7g00335 575 FunFam F-box/LRR-repeat protein 3 312 551 - -
Trre7g00335 575 Pfam Leucine Rich repeat 264 287 IPR001611 GO:0005515
Trre7g00335 575 Pfam Leucine Rich repeat 315 338 IPR001611 GO:0005515
Trre7g00335 575 Pfam Leucine Rich repeat 366 389 IPR001611 GO:0005515
Trre7g00335 575 Pfam Leucine Rich repeat 469 491 IPR001611 GO:0005515
Trre7g00335 575 Pfam Leucine Rich repeat 162 184 IPR001611 GO:0005515
Trre7g00335 575 SUPERFAMILY RNI-like 161 409 - -
Trre7g00335 575 SUPERFAMILY RNI-like 8 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00335 Trre-Chr7 2174343 2178340 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00335 K10268 - gmx:100803617 950.273