Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00332 ATGGATGAAAAAGAAATTTTGAGAGAGACTGTGTTATCTCAAGAACGACAATTACCATCTTCTTCTTCGTCTTCTCTGATCACTAATTTATACATTGCCCACTTTTTAGCTAGATGGGGTTCCAGAATGTGGGAATTCTCTGTTGGTTTATATATGATCAGTATTTGGCCAGACTCGCTTCTGTATGCAGCAATATATGGCGCTGTTGAATCTGCTTCCATTGCACTGTTTGGTCCCATAATTGGAACTTGGGTTGATAAATTGACTTATCAAAAGGTTTTGAAATTGTGGCTGGTGACACAAAATCTCTCGTTTCTTACTGCCGGTGCCACTGTAGTTGCTTTACTTGTCTACTCATCTTTGAAGTTTTCAAATTTTCCAGTTTTCTTATTTCTTGTGGTGATAATCAATATCTGTGGTGGCATTGGAGTACTTTCAACTCTTGCCGGTACTATACTGATAGAAAGAGAATGGTTGTTAGTTATATCCGAAGGTCAATCTCCGGAACTGTTGACAAAGATGAATTCGGTTACCAGACGCATCGATCTAACCTGCAAACTTCTTGCACCAGTTATAACTGGTTTCATAATAAGCTTTGTATCACTAAAAGCATCAGCTATAACTCTAGCACTTTGGAATGGTGTTTCTGTTTGGGTGGAGTATTGGCTATTTACATCTGTGTATAATGGAATTCCAGCTTTGTGTCAAAGTAGCCAGAGGAGAATGGAAAGGCTTTCATCAGAAAGTGATCTAGAAAGGAACAATTCAACTTCTGAGGGAGATAGTTTGCTTAATGATACAAGTGGTGATAGCTCAGAATTGTTAGATGGAAAAAGCAGGACAAAATTTTCTGACTGGATTTCAAAAATCTCTTATGTTGATGCTTGGAGAGTTTATTTGCAGCAAGAAGTTGTTCTTCCTGGACTAGCTTTGGCTTTGCTATTTTTCACTGTACTCAGCTTTGGAACTTTAATGACCGCCACCTTAGAATGGGAAGGTATACCTGCATATGTTATTGGAATAGCACGAGGAATAAGCGCTGTAATTGGAATAGCGGCAACAGTTTTATATCCTGTGCTACAGCATCATATATCAGCTATTAGAACTGGACTTTGGTCTATCTGGTCTCAGTGGACATGCCTACTCCCTTGTTTAGCTGCAATGTGGATCCAAAATGGCATTTTATCGTCATATGTTTTGATGGCAAGTGTCTCAATATCTCGGCTCGGACTGTGGATGTTTGACTTATCTGTACTTCAGCAAATGCAGAACCTTGTTCCCGAATCAGATCGTTTGATTGTTGGAGGTGTTCAGAATTCACTTCAGTCCTTTATGGATTTATTGGCCTATGTTATGGGAATCATAATATCTGATCCACAGGAGTTTTGGAAGTTGAGTTTATTATCATTTCTAGCAGTCACATTAGCTGCATTCCTCTACTGCATCCATGTGTTCCGCGTAAGGAAGCATATCTTTCACTTTGACAAACTATATGGTGTAATTTTTCTACATGAGCATCGTAAGTTGGGGGCCGAACCAACACAAGTTGAGGCCTAA 1557 0.3924 MDEKEILRETVLSQERQLPSSSSSSLITNLYIAHFLARWGSRMWEFSVGLYMISIWPDSLLYAAIYGAVESASIALFGPIIGTWVDKLTYQKVLKLWLVTQNLSFLTAGATVVALLVYSSLKFSNFPVFLFLVVIINICGGIGVLSTLAGTILIEREWLLVISEGQSPELLTKMNSVTRRIDLTCKLLAPVITGFIISFVSLKASAITLALWNGVSVWVEYWLFTSVYNGIPALCQSSQRRMERLSSESDLERNNSTSEGDSLLNDTSGDSSELLDGKSRTKFSDWISKISYVDAWRVYLQQEVVLPGLALALLFFTVLSFGTLMTATLEWEGIPAYVIGIARGISAVIGIAATVLYPVLQHHISAIRTGLWSIWSQWTCLLPCLAAMWIQNGILSSYVLMASVSISRLGLWMFDLSVLQQMQNLVPESDRLIVGGVQNSLQSFMDLLAYVMGIIISDPQEFWKLSLLSFLAVTLAAFLYCIHVFRVRKHIFHFDKLYGVIFLHEHRKLGAEPTQVEA 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00332 518 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 16 492 IPR009716 GO:0005381|GO:0016020|GO:0034755
Trre7g00332 518 Pfam Ferroportin1 (FPN1) 26 473 IPR009716 GO:0005381|GO:0016020|GO:0034755
Trre7g00332 518 SUPERFAMILY MFS general substrate transporter 29 490 IPR036259 -
Trre7g00332 518 Gene3D MFS general substrate transporter like domains 21 483 IPR036259 -
Trre7g00332 518 MobiDBLite consensus disorder prediction 251 272 - -
Trre7g00332 518 MobiDBLite consensus disorder prediction 246 275 - -
Trre7g00332 518 CDD MFS_SLC40A1_like 30 483 IPR009716 GO:0005381|GO:0016020|GO:0034755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00332 Trre-Chr7 2158768 2163068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00332 13 497 Organic Solute Cotransporters AT2G38460 58.607 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00332 K14685 - mtr:25491416 792.341