Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00324 ATGGCTTCAATTATTGCAAGCTTGCCACCACCATTGCTGCTCCATGGTAGAAAATCATTTCAAGGGAACTTCCAAAATTTCCCTGTTTCTCTTCTTTCAGGGAGACGAAGCAACATTGCATTTGTTGTGAAGGCTTCTGGAGAAAGTTCCGAATCTTCAACTTCACTTACTGTTTTCAAGTCTGTTCAGAGTGTTTGGGATACACCCGAGGACCGGTTGGGACTAATTGGTTTGGGATTTGCAGCTGTAGTAGCACTTTGGGCATCAACAAATTTGATAGCGGCCATTGACAAATTGCCAGTTATCCCAGTTTCTCTAGAAGTAATTGGAATTCTTTTCTCAGTGTGGTTCACTTATCGCTATCTCTTATTCAAGCCTGACCGGGAAGAACTTTTTCAAATCTTGAACAAGTCAGCTTCCGATATCTTGGGCCGTGGTTCAAAGTTCACTCCTATGTAA 459 0.4227 MASIIASLPPPLLLHGRKSFQGNFQNFPVSLLSGRRSNIAFVVKASGESSESSTSLTVFKSVQSVWDTPEDRLGLIGLGFAAVVALWASTNLIAAIDKLPVIPVSLEVIGILFSVWFTYRYLLFKPDREELFQILNKSASDILGRGSKFTPM 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00324 152 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 61 144 IPR025564 -
Trre7g00324 152 PANTHER - 42 145 IPR033344 GO:0009579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00324 Trre-Chr7 2110614 2113040 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00324 - - cam:101512436 238.81