LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre7g00323	ATGGTTAGAGCACTAGAACAAGAACAGGAAAATTATAAGTCCAAATTATTCCATTTCAAAGGAATGTTTGACAATACAGGGAGGCATTCAAAAAGTTTAAGCATTGAAAGTGCTAGCTCATTAGATCCTACACCAGAAGATGATATAGTTTCATCAAGAAGTCAAGGATCAAAACCTCTACATCATGATCCTGAAAGGGCTCTACCTAACAAGTCAAGAACAATAAAGGAGGAGATTGTGGCCAAAGAAGCCAAAGAGAAACATGTGCAAGAAACCGAACAGATGAAGGAGAGATTTGCTAAACTACTATTAGGAGAGGATATGTCTGGTGGAGGGAAAGGTGTTTCTTCAGCTTTGGCATTGTCAAATGCATTAACAAATCTTGCTGCTTCTGTTTTCGGTGAACAAAGGCGGCTAGAGCCAATGCCAGCGGAAAGGAAAGCCAGATGGAGAAAAGAAATCGATTGGCTTCTTTCGGTTACCGATTACGTTGTTGAAATGGTTCCTACACAACAGAAAGGCAAGGATGGTTCAACCATGGAGATTATGACAACACGGCAACGAACCGATCTTCACATGAATATCCCTGCCTTGAGAAAGCTTGATACAATGCTTATTGATTGTCTAGATAACTTCAAAGACCAAAACGAATTCTATTATGTATCGAAAGATGCTGATGATAAAGACTCATCAAAAGGAAAAAATGATGACAAGTGGTGGTTACCTACACCTAAAGTACCTGTAGATGGTTTATCTGATGCAGCAAGAAGATTTCTACAGTATCAGAAAGATTGTGTGAATCAAGTACTTAAAGCAGCAATGGCTATAAATGCTCAAACTCTATCAGAAATGGCGATCCCTGAAAGCTATATTGAAGCCCTACCTAAGAATGGAAGAGCCAGTCTAGGGGACTTGATCTACCGGAGCATTACCGATGATTTTTTTGATCCTGATCAGTTCCTAGCAACAGTTGACATGTCAACAGAACATAAGATTCTTGATCTTAAGAACAGAATTGAGGCATCAATAGTGATTTGGAAGAGGAAGATGAACCAAAAAGATTCCAAATCAGCATGGGGTTCTGCTGTGAGTATTGAGAAAAGAGAACTCTTTGAAGAGAGAGCAGAAACCATCTTACTTCTCTTGAAGCATAGATTTCCAGGGCTTCCCCAATCTTCATTAGATATTAGCAAAATCCAATTCAACCGGGATGTAGGACAAGCTGTTCTTGAAAGTTATTCAAGAATATTGGAAAGTTTGGCCTTTACAGTGCTATCAAGAATAGAAGATGTACTACATGCAGATTGCCAAACACAAAATCCATCACAAGGAAGAAGAAGCGGTATGAGAAATTCAGTTCCAAAGCCAGACAAGTGTCCGACTCCTCCAAGAGAAGAAGTAGACAAGAACGGTGCAGAAACTCCTTGTTCGATGACACTATCAGATTTCATGGGTTGGAGCGGTGATCAAGGTGAATCAGACCCTAACAAGAAGGATCCTCTTGCAGTTTCAGATGATTCGGACAAAGATATTGATAGCGGAAAGCTACAAAAACTTCCACTCATATCAACTGATAAGAAATTGTCCTACGTTGAAAATATAGGAGGTATGAGAAGTCCAACATCACGCCATTGA	1635	0.3969	MVRALEQEQENYKSKLFHFKGMFDNTGRHSKSLSIESASSLDPTPEDDIVSSRSQGSKPLHHDPERALPNKSRTIKEEIVAKEAKEKHVQETEQMKERFAKLLLGEDMSGGGKGVSSALALSNALTNLAASVFGEQRRLEPMPAERKARWRKEIDWLLSVTDYVVEMVPTQQKGKDGSTMEIMTTRQRTDLHMNIPALRKLDTMLIDCLDNFKDQNEFYYVSKDADDKDSSKGKNDDKWWLPTPKVPVDGLSDAARRFLQYQKDCVNQVLKAAMAINAQTLSEMAIPESYIEALPKNGRASLGDLIYRSITDDFFDPDQFLATVDMSTEHKILDLKNRIEASIVIWKRKMNQKDSKSAWGSAVSIEKRELFEERAETILLLLKHRFPGLPQSSLDISKIQFNRDVGQAVLESYSRILESLAFTVLSRIEDVLHADCQTQNPSQGRRSGMRNSVPKPDKCPTPPREEVDKNGAETPCSMTLSDFMGWSGDQGESDPNKKDPLAVSDDSDKDIDSGKLQKLPLISTDKKLSYVENIGGMRSPTSRH	544

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre7g00323	544	FunFam	Rop guanine nucleotide exchange factor 14	84	315	-	-
	Trre7g00323	544	FunFam	Rop guanine nucleotide exchange factor 9	285	401	-	-
	Trre7g00323	544	MobiDBLite	consensus disorder prediction	436	518	-	-
	Trre7g00323	544	MobiDBLite	consensus disorder prediction	30	57	-	-
	Trre7g00323	544	Gene3D	PRONE domain, subdomain 2	285	401	-	-
	Trre7g00323	544	FunFam	Rop guanine nucleotide exchange factor 14	317	443	-	-
	Trre7g00323	544	Pfam	PRONE (Plant-specific Rop nucleotide exchanger)	91	439	IPR005512	GO:0005085
	Trre7g00323	544	Gene3D	PRONE domain, subdomain 1	96	435	-	-
	Trre7g00323	544	MobiDBLite	consensus disorder prediction	492	515	-	-
	Trre7g00323	544	ProSiteProfiles	PRONE domain profile.	82	445	IPR005512	GO:0005085
	Trre7g00323	544	MobiDBLite	consensus disorder prediction	30	71	-	-
	Trre7g00323	544	PANTHER	ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1	43	490	IPR038937	GO:0005085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre7g00323	Trre-Chr7	2102355	2105492	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre7g00323	-		-	gmx:100777496	810.061