Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00321 ATGGAATCAATAGGCGTTCTCCTGGTAGCTAAAGTAATTCCATACTTAGAACAAGAACTCAACAAACGCTACAATCTTTTCCGCATATGGGATTACCCACAAATCTCCCAACTCTTAACTCAACATGCCGCGTCGATCCGTGCGGTGGTCGGACGCTCCAACGCCGGCGCCGATTCCGACCTCATTGATGCACTACCCAATCTGGAAATCGTTTCCAGCTCCAGTGTTGGTGTTGATTTGATCGACATTAACAAATGTAAGGAGAAAGGAATTCGTGTTACGAATACTCCTCATGTTTTGACCGATGAGGTTGCTGATTTGGCTATTGGTTTGATTCTTACGCTTCTTAGGAGAATTTGTGAATCTGATCGATATGTTAGAAGTGGAAATTGGAAGTGTGGTGATTATAAGTTGACTACTAAGTTCTCTGGGAAAACCGTTGGCATTGTTGGGCTAGGAAGGATTGGCACAGCAATTGCCAAGAGAGCTGAAGCTTTTAATTGTTCAATATGCTACTATTCTAGAACTCAAAAGCAGGAGTCAAAATACAAATACTATCCAAGTGTTGTTGAACTAGCATCCAACTGTGATATACTAGTTGTTGCTTGCCCTCTTACCGAGGAAACCCATCACATCATCAACCGGGAGGTCATTAATGCACTCGGTTCGAAGGGTTTCCTGATTAACATCGGCCGAGGTAAGCATGTTGATGAGCCAGAGCTGGTCTCTGCATTGCTCGAAGGTCGTTTGGGTGGAGCTGGACTAGATGTGTTTGAAAAGGAACCTCATGTTCCCCAAGAGCTATTTGGGCTAGAAAATGTTGTCTTGTTGCCTCATGTAGGAAGCGGCACGGTAGAAACTCGAACTGTCATGGCTGATCTTGTTCTTGGAAACCTGGAGGCTCATTTCCTTGGAAAGGCTCTGTTAACTCCCTTGGTTTAA 942 0.4437 MESIGVLLVAKVIPYLEQELNKRYNLFRIWDYPQISQLLTQHAASIRAVVGRSNAGADSDLIDALPNLEIVSSSSVGVDLIDINKCKEKGIRVTNTPHVLTDEVADLAIGLILTLLRRICESDRYVRSGNWKCGDYKLTTKFSGKTVGIVGLGRIGTAIAKRAEAFNCSICYYSRTQKQESKYKYYPSVVELASNCDILVVACPLTEETHHIINREVINALGSKGFLINIGRGKHVDEPELVSALLEGRLGGAGLDVFEKEPHVPQELFGLENVVLLPHVGSGTVETRTVMADLVLGNLEAHFLGKALLTPLV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00321 313 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 IPR029752 -
Trre7g00321 313 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 4 308 - -
Trre7g00321 313 Gene3D - 101 284 - -
Trre7g00321 313 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 281 IPR006140 GO:0051287
Trre7g00321 313 Gene3D - 17 306 - -
Trre7g00321 313 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 6 134 - -
Trre7g00321 313 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 309 IPR006139 GO:0016616|GO:0051287
Trre7g00321 313 CDD HPPR 4 303 - -
Trre7g00321 313 FunFam Putative 2-hydroxyacid dehydrogenase 101 284 - -
Trre7g00321 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 282 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00321 Trre-Chr7 2093281 2095296 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00321 - K18606 mtr:11418154 546.199