Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00316 ATGAGTATGCCGAAACCTAATCAAGTAGCAGTTAGAGACCTTGTTGAGGAAGCTAAGAAACGAATTGTTATTCTCATCGTTTGCGTCGTTGGACTCTCCTATCTAATGTCATTGACAAGCTCCTCAGTTTGGGTCAACTTGCCTGCTGCAGCCTCCTTACTTATCGTTTTCCGCTATTTATCACTGGATTATGAAATGAAGAGAAAAGCTGCAGCATACAACAATAAATCAGGCTCCACCAGTATTCAGTCTTCAAAGAAGCCTATCGAAAATACTAAAGCAGTTGCAAAGTTTGAGTGGCGAGCAAAAGTGAATTCTCCTGTTGTTGAGGATGCAATTGATCACTTCACCAGACATCTTATTTCTGAGTGGGTAACAGACCTTTGGTACTCTCGTTTAACACCAGATAAAGAGGGTCCCGAGGAGTTGGTGCAAATAATTAATGGTGTTCTTGGTGAAATTTCAGGACGCATGCGAAATATAAATCTGATTGATTTTTTGATAAGGGATCTTGTTAATCTCATTTGCACTCACTTGGAGCTGTTTCGTGCTGCTATCTCAAAGATTGAAAAACAACACACAGATTCATTAACAATTGAAAGACGGGATACAGAGCTAAAAATTGTGTTGGCAGCAGAAGACAAATTGCATCCTGCTTTATTCTCTTCTGAAGCTGAGCACAAGGTTTTGCAGCATCTGATGAATGGTCTTATGTCTGTCACTTTCAAGTCTGAGGATCTGGGTTGTTCTTTCTTTCGATATATTGTCAGGGAGCTTCTTGCATGTGCTGTAATGCGACCTGTCCTAAATTTAGCCAATCCCAGATTTATTAATGAAAGAATTGAGTCTGTGGTAATTAATAAGACCAAGGCTAACAAGGGGGTTGATGCAGCTCAAGGGCTATCCCACACTAAAGAAGATGAGTCACAAACTTCATCTGATCATTTTTCCAAGTGTTTAGATCCTTCCGCTACTGGTGTTGAGCTTACACAGCTAAAAAATGGTCAGTCCAGGAATTCAGAGCCATCTGCAGAAAGAAAGGTTTCTGATAACCTTTCTAGAGACCCGTTGCTTTCAATGGATACTCGATCTTCCCGCTCATGGAACTCTTTGCCTGGAAACTCACAAAGTAATGGTGACCAAGGTATTCAACGATATCGCTCAGGAGGAGAGTGGGGAGATATTTTAGATGTCGTCTCTCGAAGAAAGACCCAAACTCTTGCTCCAGAACATTTTGAGAATGTGTGGGCAAAAGGCAAAAATTACCAGAAAAAGGATGGAGAGAACCAGTCAAACGAGCGAGCTCCACAACATCCCCCAACAGAAAAATCACTCAAGGTAGATCATATAAAGGCAACATCTGGACCCAAAGAAAACAATACTAGATTGAAGCTTAATCCCTCTAAGGGAGGCCACATTAATTCTGGATACAGCAGTCAATTCACTGTTGAACATCCATCCTTTCATGCAGACAAGAATGGGTCAACTTGTTCTTCAGTCACCTCGTATAAAGATGACGAGGAAAGCCACATTAATAGGAATGTTAGTGAATCAGAGAGCAATACTTCTTATACTTCTGAAGATGATGAAACTAGTACTGTTACTGGTCTTGATTCCCCTGTAACTAAGGTTTGGGATGGAAAAAGTATCAGAAACCAGGCTGTTTCTTATGTTCATCACCCACTTGAAAATGTTGATAGCCACAGTACAAAGAAAAGGAATAAGAACCGTTCCCGTTATCCGAGATCATTCAGAACACAATCTGGCAGTAAAAGGTCTCGGTCAAGCGATTTAAAGACAAATATGTGGCAGGAAGTTGAGAGGTCAAGCTTTTTATCTGGTGATGGTCAAGACATACTGGGCTCTTCAAAATCACATGTGAATTCTGACGGGTCCTCTGATGATACTGATTTTGGAAGTTTGGGTAGAATTTATAGCGGAGCAGCTGCCTCTTCGTCCTCAATTTCTAAATCAGAATCTTCTAGTTTGGCTGTTAATCCCCTGAGAAGTTCTTCTGCCGTAGATTCCTTTTACAAGTTGAGATGCGAGGTCTTGGGTGCAAATATTGTCAAGAGTGGTTCAAGAACGTTTGCCGTTTACTCCATATCTGTTACAGATGTAAATAACAACAGTTGGTCCATTAAAAGAAGGTTTCGTCATTTTGAGGAGCTGCATCGGCGCCTGAAAGAGTTCTCTGAGTATAATCTTCATTTGCCACCTAAACATTTTCTGTCAACTGGTTTAGATGTAGCAACCATTCAAGAGCGGTGTGAATTGCTTGATAAATATTTGAAGAAACTTATGCAGCTACCTACAGTTTCAGAATCAATTGAATTGTGGGACTTTCTGAGTGTTGACTCTCAGACGTACGTATTCTCAAATTCTTTTTCTATCATGGAAACATTACCAGTTGGCTTGGATGCTAAGTCGTCTGAGAAGACTAAAATGACTTCCAATGTTTCTGCACCCGGAAGTGACCCTTTTTTGCGAAAAAGAAATAATGCCGTGGCTAATGGATCGAGATCAACAGTAAATAGCACACCTCTTCCTCTACCAACAAAAAAGAATACACAGGAATCAAGACAGTCATTTGACAATTCTGGAAGCAATGCAGATATTCCACCATGGAAGAGTGCACCTTCTCCCAATAACTCGCAAAAGTCGGTGAAAGGAAGAGATAATTCAGGCGAGGTCTCTGATGTGCCGCATGATGCTGCTGAAACTCTTCCAACAGAGTGGGTGCCACCAAATTTAAGTGTACCCATATTGGATCTGGTTGATGTTATCTTCCAGCTGCAAGATGGTGGATGGATTAGGAGGCAGGCTTTCTGGGTTGCTAAACAAGTCTTACAACTAGGTATGGGCGATGCCTTGGATGATTGGCTGTTAGAGAAAATTCTGCTTCTCCGAAAGGGATCGGTGATTGCTTCAGGGGTCACACGAGTTGAGCAAATACTCTGGCCTGATGGAATTTTCTTAACCAAGCATCCAAATCGACGACCACCTAGCAGTCCATCTCAGAGTTCACCTAATGGCCATCAACCTACTACACCAGTATCTTCTCCAAGGATGGATGATGAGCAGCAACAAGAGGCGGATCGGCGCGCAAAGTTTGTATATGAGCTAATGATTGATCATGCACCACCAGCAATTGTAGGTCTTGTTGGAAAGAAGGAGTATGAACAATGTGCAAGGGATCTTTATTTCTTTCTTCAGTCATCTGTTTGCTTGAAGCTGCTGGCTTTTGATCTCCTGGAGATGCTGCTTTTGTCAGCATTTCCAGAACTTGATGATGTATTCAAGCAGGTGCATGAAGAAAAGCATAGATTTGGTGAGCTCGTCAAGTAA 3348 0.4164 MSMPKPNQVAVRDLVEEAKKRIVILIVCVVGLSYLMSLTSSSVWVNLPAAASLLIVFRYLSLDYEMKRKAAAYNNKSGSTSIQSSKKPIENTKAVAKFEWRAKVNSPVVEDAIDHFTRHLISEWVTDLWYSRLTPDKEGPEELVQIINGVLGEISGRMRNINLIDFLIRDLVNLICTHLELFRAAISKIEKQHTDSLTIERRDTELKIVLAAEDKLHPALFSSEAEHKVLQHLMNGLMSVTFKSEDLGCSFFRYIVRELLACAVMRPVLNLANPRFINERIESVVINKTKANKGVDAAQGLSHTKEDESQTSSDHFSKCLDPSATGVELTQLKNGQSRNSEPSAERKVSDNLSRDPLLSMDTRSSRSWNSLPGNSQSNGDQGIQRYRSGGEWGDILDVVSRRKTQTLAPEHFENVWAKGKNYQKKDGENQSNERAPQHPPTEKSLKVDHIKATSGPKENNTRLKLNPSKGGHINSGYSSQFTVEHPSFHADKNGSTCSSVTSYKDDEESHINRNVSESESNTSYTSEDDETSTVTGLDSPVTKVWDGKSIRNQAVSYVHHPLENVDSHSTKKRNKNRSRYPRSFRTQSGSKRSRSSDLKTNMWQEVERSSFLSGDGQDILGSSKSHVNSDGSSDDTDFGSLGRIYSGAAASSSSISKSESSSLAVNPLRSSSAVDSFYKLRCEVLGANIVKSGSRTFAVYSISVTDVNNNSWSIKRRFRHFEELHRRLKEFSEYNLHLPPKHFLSTGLDVATIQERCELLDKYLKKLMQLPTVSESIELWDFLSVDSQTYVFSNSFSIMETLPVGLDAKSSEKTKMTSNVSAPGSDPFLRKRNNAVANGSRSTVNSTPLPLPTKKNTQESRQSFDNSGSNADIPPWKSAPSPNNSQKSVKGRDNSGEVSDVPHDAAETLPTEWVPPNLSVPILDLVDVIFQLQDGGWIRRQAFWVAKQVLQLGMGDALDDWLLEKILLLRKGSVIASGVTRVEQILWPDGIFLTKHPNRRPPSSPSQSSPNGHQPTTPVSSPRMDDEQQQEADRRAKFVYELMIDHAPPAIVGLVGKKEYEQCARDLYFFLQSSVCLKLLAFDLLEMLLLSAFPELDDVFKQVHEEKHRFGELVK 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00316 1115 MobiDBLite consensus disorder prediction 439 455 - -
Trre7g00316 1115 SMART PX_2 682 786 IPR001683 GO:0035091
Trre7g00316 1115 MobiDBLite consensus disorder prediction 997 1030 - -
Trre7g00316 1115 Pfam Sorting nexin C terminal 937 1074 IPR013937 -
Trre7g00316 1115 MobiDBLite consensus disorder prediction 835 892 - -
Trre7g00316 1115 Pfam PX domain 709 786 IPR001683 GO:0035091
Trre7g00316 1115 ProSiteProfiles PXA domain profile. 106 285 IPR003114 -
Trre7g00316 1115 PANTHER PX SERINE/THREONINE KINASE PXK 102 1111 - -
Trre7g00316 1115 MobiDBLite consensus disorder prediction 515 539 - -
Trre7g00316 1115 ProSiteProfiles PX domain profile. 678 790 IPR001683 GO:0035091
Trre7g00316 1115 MobiDBLite consensus disorder prediction 355 384 - -
Trre7g00316 1115 MobiDBLite consensus disorder prediction 614 634 - -
Trre7g00316 1115 MobiDBLite consensus disorder prediction 561 600 - -
Trre7g00316 1115 MobiDBLite consensus disorder prediction 300 314 - -
Trre7g00316 1115 MobiDBLite consensus disorder prediction 421 541 - -
Trre7g00316 1115 MobiDBLite consensus disorder prediction 810 910 - -
Trre7g00316 1115 MobiDBLite consensus disorder prediction 456 502 - -
Trre7g00316 1115 MobiDBLite consensus disorder prediction 296 388 - -
Trre7g00316 1115 MobiDBLite consensus disorder prediction 327 342 - -
Trre7g00316 1115 Gene3D - 678 794 IPR036871 GO:0035091
Trre7g00316 1115 SMART PXA_3 110 289 IPR003114 -
Trre7g00316 1115 SUPERFAMILY PX domain 679 787 IPR036871 GO:0035091
Trre7g00316 1115 MobiDBLite consensus disorder prediction 999 1025 - -
Trre7g00316 1115 Pfam PXA domain 106 283 IPR003114 -
Trre7g00316 1115 MobiDBLite consensus disorder prediction 581 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00316 Trre-Chr7 2069810 2078626 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00316 K17925 - gmx:100790491 1672.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00316 7 2069810 2078626 Trre7g00316 7 2069810 2078626 ECH