Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00303 ATGTTTCGGTGGCTATTGAAGCCTAAATTCTATTCAAAATGTATATATTATGTGAAGTGCATAAAGACTCGGTTAGAGACGATAGAGAAGAAGAGAAGGGCTATTCAGAAGTTTACGAAGAGTGACATCGCTGAGCTTCTTAGGAGAGGATTTGATTATGATGCATATAAAAGGACTGAAGGGCTTCTGTTGGAGGAAAAAATATTATCATGCTATGAATTCATTGAAAAGTTTATTGGATGCATATCAGATCATCTTGAAGACATAATTAAACAAAGTGATTGCCCTGAGGAATGCAAGGAAGCAATACCATCATTGATGTATGCTGCAGCAAGAATTTCTGATCTACCGGAATTGCGTGACCTCAGAACATTGTTTACAGAAAAATATGGAAATTCTCTTGAACCATACATAAATAAAGAGTTTGTTGAGAGATTGAGAAGAGATCCTCCTACAAGAGAAATGAAGATTAAGTTATTATATGATATTGCACATGAGTTCTCTATAGATTGGGATGCAAAAGCATTGAAGTTAAGACTTTATACACATCCATCACTATATGAAGAGAGGCCTAAGTCTGGTGGAAGTGGAGGAGAACACAAAGATGAAAGTAACTTCATTGCATCCAAAGAAAATGAGGCAAGGCACCAAAACAGTAGTGATGATGAAACAACAAGCACTGACACAGACACTGACACATCGTCATCACATCATCATGGGAGAAAAGCAAGTTCAAGTTCATTTGGAAGCATATCCGAAGATGATCATGAACAAGTAAAAGAAATCAAGAAGCCAAATTCCTTTTGGCACATTCCACCTCCTTACATCAAACAACAAAAGACTAATAACAAAGGTGGTGAAAGTAATAACAATTTAAACAAAACAACAGATTCTGAAGCAATACAGAAAAACATTGATTCAAGTGGTGGAATGAAACCAACAATTTCATTGGAAACATCATCATCAACAACAACAAAAGGGAATGCGTGGGGTGGTGGATGGCGCATGCCTTCTACTTTACCTGATTATGATGATTTCATTGCTCGTTTTAAAGCTTTCACAGGAAGATCATAG 1074 0.365 MFRWLLKPKFYSKCIYYVKCIKTRLETIEKKRRAIQKFTKSDIAELLRRGFDYDAYKRTEGLLLEEKILSCYEFIEKFIGCISDHLEDIIKQSDCPEECKEAIPSLMYAAARISDLPELRDLRTLFTEKYGNSLEPYINKEFVERLRRDPPTREMKIKLLYDIAHEFSIDWDAKALKLRLYTHPSLYEERPKSGGSGGEHKDESNFIASKENEARHQNSSDDETTSTDTDTDTSSSHHHGRKASSSSFGSISEDDHEQVKEIKKPNSFWHIPPPYIKQQKTNNKGGESNNNLNKTTDSEAIQKNIDSSGGMKPTISLETSSSTTTKGNAWGGGWRMPSTLPDYDDFIARFKAFTGRS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00303 357 Gene3D - 6 177 IPR042277 -
Trre7g00303 357 MobiDBLite consensus disorder prediction 276 329 - -
Trre7g00303 357 MobiDBLite consensus disorder prediction 210 335 - -
Trre7g00303 357 PANTHER IST1 FAMILY MEMBER 13 353 IPR005061 GO:0015031
Trre7g00303 357 FunFam Vacuolar protein sorting-associated protein IST1 6 179 - -
Trre7g00303 357 Pfam Regulator of Vps4 activity in the MVB pathway 18 170 IPR005061 GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00303 Trre-Chr7 2008529 2010882 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00303 - - gmx:102665874 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00303 7 2008529 2010882 Trre7g00303 7 2008529 2010882 ECH