Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00291 ATGTTCTATGGTGCAGTGGTATGGGACCCTTGGCTTATTGTTGCTCAAATTGTTTGTCTTCAATGTATGTACTATAGCACACTTGGATTTTTCTTAAGCATTCTTGTTGGCACTCGCGTTTCACGGTTGAGCCTTGTGTATTTCTTTGACTATGCAACCGTTACTACTTCTACCGTTACTGGTTGGTGTGTTTGTGCTTCATTTCTTCTCAGCTCAGCTGCAGGGGCTGTATATATGCTTTATTTGATTGAAAGAGCAAAGAAGTGTTTGGATTTTTCAGTCACTCTCTATATCATCCATCTTTTCATATGCATTGTGTATGGGGGTTGGCCCTCTTCTATAGCTTGGTGGATTGTGAATGGTACTGGAATTGCATTGATGGCTCTGCTAGGCGAATATCTGTGTATCAGACGGGAACTCCAGGAGATACCAATACCACGATATCGTTCAAATGTTTGA 459 0.4139 MFYGAVVWDPWLIVAQIVCLQCMYYSTLGFFLSILVGTRVSRLSLVYFFDYATVTTSTVTGWCVCASFLLSSAAGAVYMLYLIERAKKCLDFSVTLYIIHLFICIVYGGWPSSIAWWIVNGTGIALMALLGEYLCIRRELQEIPIPRYRSNV 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00291 152 PANTHER SYS1 1 150 IPR019185 -
Trre7g00291 152 PIRSF SYS1_homolog 1 152 IPR016973 GO:0000139
Trre7g00291 152 Pfam Integral membrane protein S linking to the trans Golgi network 5 144 IPR019185 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00291 Trre-Chr7 1948656 1951988 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00291 K20318 - tcc:18595890 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00291 7 1948656 1951988 Trre7g00291 7 1948656 1951988 ECH