Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00283 ATGGCTAATTCTGTTGAAGAAGATGTTGATTATGAGAGTGATCCTGAAGAAGCAAATCGATCTCTTCTTACAATGCGGAGACGTGAAGCTAGTGATGATGAAGAAGAAGAAAGAGAAGGAGAAGGTGATAGAGATGATGATGATTCAGTTAAGAGTGAAGATCTTCGTGTTAGGGTTCGTTCTGATGATTCAGATGGTGAAGGTGGTGTTGCTGATTATGATGATGATGATAATGAGGAAGTTGAAGAGGAGGAAGAATATGATGAAGTTGAAGATGAAGAAGAAGAAGAGTATGAGGAAGTTTATGTGGAGAAAGGTGTAAGTGGGGTTGAGGGTTCAGTGATTGTGGTTAAGGAATCTGATGGTGATGTTATACCTTCTTTGGAAGAAGATTCTGCTGAGGTCAATACTGAGGAGAAAAAGGAAAATGAACCATTTGCTGTGCCCACTGCTGGTGCCTTTTACATGCATGATGATCGTTTCAGGGACAATTCCGGTGCCCGCCAAAGGCGGATGCATGGTGGAAGGAGATTGTGGGAGTCCAAAGATGACAAGAAATGGGGACATGATAAATTTGAGGAAATTTCAGTGCAGGATAGGCGCTATGATGAGAGGAGGAGACCTTCTAGGGGTAATTTTCGAGGGCGAGGTAGAGCTCGTGGCACTGATCGTGGGGGACATGTTCGAGGAAACAGGAGAGAATATAATGAAAGAGAATATAACAACAGAGAATTTAACAACAGGGAATATAACAATGGTAGCAATCAAAATCAGGTGCCTAAGGTTGTTGTGAAAGGAAGAGGGCCACGTAGGTATGAACCTACTAATAGAAGGAATGGTCCAGCTCCTCAGGTGCAAAATAAACAATCTGGAAAATCTCAGGAGAAAACCTCACATGTTAGTTCAGAGAGAGTTTCCAAACCAGCATCCAATGCAGAATCTGACCCCATGCCTGCTAAGAAAAACTCAGTTTCTTCAAATTTGAACTATGCATCCCCGCCATTTTATCCATCAGGCTCTTCCAACAAAGAAATTAATCTGGCGCAAAAACAGGATGTACAAGGCAGCACCAGCAGGAATATTCGTCCTGGTATGAATGAGGGTTTTCCAGCCCAACAAAACAATGCAATTCATCGGGGAAAGAATGTTGTTGATCCCATTAGCATGGATAAGCTGTATATTGATGAGTCTGTCGGCCCATCTGTTGGAAAGCCTTTGAACAATGTTCATTTGGCACCATCTGGGCATGCTTCTCAGTCTCCTTTTCCCCGGCCTGCTGGGCCTGGGAGAGGTGCACCAATCCCATTACAGATGAATTATCCACATGTTCCCTCGCATAATCAAGCAAATAACGTTTCTCCAATGCAAATGCAAGCTATTCAGAGAAGTTCTGTACCGGGGCGGACTTTAACGTCTGTGCAAGCTACGGCTCCACAGACAGGCCATCGACCTGGTAGTGGATCTCAGTCTTCATCTCCTCCAAAAAGATCCGCATCAATTAATTCACTGGATTCTGGAGACATGGATGCCTCCTCGGAATCAGGTAAAGCCAAAGGAGCATTGGTTGGGAAGGGTAGAGGAGCTCCCCAGGGTGCTGGAAGGGGACCTTTTGTTTATGGTGGGGCTGCTGGAAATATGGCCATCAGTCAAGGAGATCCGAACTTCCCTGCCTTCTTGCCAGTCATGCAATTTGGGGGCCAGCATCCTGCTGGTATGGGGGTTCCTGCTGTTGGCATGGCATTCCCTGGATATGTTCCTGGAAAATCAGAAATGACATGGCTACCAGTCTTGGCTGGTGCTGCAGGGGCTTTAGGGGCTCAATACTGTTCACCATACCTTTCTGTTGATGGTGCTTACGGTCGACAACCAGGACAGACCTCTGCAATTGATTCTTCAAGCAAGGAAAACAATGTGAATAAAGCTAATAATAATGAATTGAAGCCACCACAAAAATCTGATTTGGTAAACGACGAGTATGGACAACGTCAGAATAAACCTCGCAGATATTCGGAGATGAATTTTGGTCAGTGA 2031 0.4485 MANSVEEDVDYESDPEEANRSLLTMRRREASDDEEEEREGEGDRDDDDSVKSEDLRVRVRSDDSDGEGGVADYDDDDNEEVEEEEEYDEVEDEEEEEYEEVYVEKGVSGVEGSVIVVKESDGDVIPSLEEDSAEVNTEEKKENEPFAVPTAGAFYMHDDRFRDNSGARQRRMHGGRRLWESKDDKKWGHDKFEEISVQDRRYDERRRPSRGNFRGRGRARGTDRGGHVRGNRREYNEREYNNREFNNREYNNGSNQNQVPKVVVKGRGPRRYEPTNRRNGPAPQVQNKQSGKSQEKTSHVSSERVSKPASNAESDPMPAKKNSVSSNLNYASPPFYPSGSSNKEINLAQKQDVQGSTSRNIRPGMNEGFPAQQNNAIHRGKNVVDPISMDKLYIDESVGPSVGKPLNNVHLAPSGHASQSPFPRPAGPGRGAPIPLQMNYPHVPSHNQANNVSPMQMQAIQRSSVPGRTLTSVQATAPQTGHRPGSGSQSSSPPKRSASINSLDSGDMDASSESGKAKGALVGKGRGAPQGAGRGPFVYGGAAGNMAISQGDPNFPAFLPVMQFGGQHPAGMGVPAVGMAFPGYVPGKSEMTWLPVLAGAAGALGAQYCSPYLSVDGAYGRQPGQTSAIDSSSKENNVNKANNNELKPPQKSDLVNDEYGQRQNKPRRYSEMNFGQ 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00283 676 MobiDBLite consensus disorder prediction 279 296 - -
Trre7g00283 676 MobiDBLite consensus disorder prediction 462 532 - -
Trre7g00283 676 MobiDBLite consensus disorder prediction 49 67 - -
Trre7g00283 676 MobiDBLite consensus disorder prediction 1 98 - -
Trre7g00283 676 MobiDBLite consensus disorder prediction 462 509 - -
Trre7g00283 676 MobiDBLite consensus disorder prediction 407 450 - -
Trre7g00283 676 MobiDBLite consensus disorder prediction 316 342 - -
Trre7g00283 676 MobiDBLite consensus disorder prediction 34 48 - -
Trre7g00283 676 MobiDBLite consensus disorder prediction 622 650 - -
Trre7g00283 676 MobiDBLite consensus disorder prediction 68 98 - -
Trre7g00283 676 MobiDBLite consensus disorder prediction 246 261 - -
Trre7g00283 676 SMART Btz_2 115 223 IPR018545 GO:0003729|GO:0006397|GO:0035145
Trre7g00283 676 MobiDBLite consensus disorder prediction 160 245 - -
Trre7g00283 676 PANTHER PROTEIN MLN51 HOMOLOG 1 676 IPR044796 GO:0003729|GO:0006397|GO:0035145
Trre7g00283 676 Pfam CASC3/Barentsz eIF4AIII binding 130 218 IPR018545 GO:0003729|GO:0006397|GO:0035145
Trre7g00283 676 MobiDBLite consensus disorder prediction 121 146 - -
Trre7g00283 676 MobiDBLite consensus disorder prediction 160 342 - -
Trre7g00283 676 Coils Coil 73 100 - -
Trre7g00283 676 MobiDBLite consensus disorder prediction 15 33 - -
Trre7g00283 676 MobiDBLite consensus disorder prediction 622 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00283 Trre-Chr7 1898529 1901958 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00283 - - mtr:25491383 935.636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00283 7 1898529 1901958 Trre7g00283 7 1898529 1901958 ECH