Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00237 ATGAGTAGGCCAGGAGACTGGAACTGCAGGTCATGCCAACACATGAACTTTCAAAGGCGCGAATCGTGTCAAAGATGCGGTGATTCGAAATATGGAGACAGAATTGATTATGGATCAGTTTTTGGAGGAATTAGAGGAGGGTCTTCATTTGGTTTAAGTGGTTCAGATGTTCGTTTAGGTGATTGGTATTGTGGTGCTGGTAATTGTGGTGCACACAATTTTGCTAGTCGTTTAAGTTGCTTCAAGTGTGGTGCTTTCAAAGATGATTTATCTGGTGGAGGATTTAACAATAGTGATATCTTGCTTTCAAGAGGCTTTGGTGGAAGTACAAGACCTGGATGGAAATCTGGTGACTGGATATGCAACAGGTTAGGATGCAATGAGCACAACTTTGCTAGTAGAATGGAATGTTTCAAATGCAGTGCACCAAGAGACACCTACTAG 444 0.4212 MSRPGDWNCRSCQHMNFQRRESCQRCGDSKYGDRIDYGSVFGGIRGGSSFGLSGSDVRLGDWYCGAGNCGAHNFASRLSCFKCGAFKDDLSGGGFNNSDILLSRGFGGSTRPGWKSGDWICNRLGCNEHNFASRMECFKCSAPRDTY 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00237 147 SUPERFAMILY Ran binding protein zinc finger-like 109 145 IPR036443 -
Trre7g00237 147 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Trre7g00237 147 ProSitePatterns Zinc finger RanBP2-type signature. 62 83 IPR001876 -
Trre7g00237 147 SUPERFAMILY Ran binding protein zinc finger-like 2 33 IPR036443 -
Trre7g00237 147 SMART zf_4 5 29 IPR001876 -
Trre7g00237 147 SMART zf_4 117 143 IPR001876 -
Trre7g00237 147 SMART zf_4 60 86 IPR001876 -
Trre7g00237 147 Gene3D - 2 32 - -
Trre7g00237 147 Gene3D - 53 89 - -
Trre7g00237 147 Gene3D - 110 146 - -
Trre7g00237 147 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Trre7g00237 147 ProSiteProfiles Zinc finger RanBP2 type profile. 115 146 IPR001876 -
Trre7g00237 147 FunFam Ran-binding zinc finger protein 107 146 - -
Trre7g00237 147 SUPERFAMILY Ran binding protein zinc finger-like 53 88 IPR036443 -
Trre7g00237 147 PANTHER ZINC FINGER PROTEIN 56 145 - -
Trre7g00237 147 Pfam Zn-finger in Ran binding protein and others 3 28 IPR001876 -
Trre7g00237 147 Pfam Zn-finger in Ran binding protein and others 115 144 IPR001876 -
Trre7g00237 147 Pfam Zn-finger in Ran binding protein and others 60 85 IPR001876 -
Trre7g00237 147 ProSitePatterns Zinc finger RanBP2-type signature. 119 140 IPR001876 -
Trre7g00237 147 FunFam Ran-binding zinc finger protein 52 89 - -
Trre7g00237 147 ProSiteProfiles Zinc finger RanBP2 type profile. 58 89 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00237 Trre-Chr7 1602380 1603844 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00237 - - tpra:123921568 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00237 7 1602380 1603844 Trre7g00237 7 1602380 1603844 ECH