Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00236 ATGGCGTTTTTCTCTTCAACTGCAACCGTTCCACAAAACCTCACCTTCGTTTCCTCTAACAAACTCTCATTCTCTCCTTCTTCTACGACGTCGTTTAACTTCGTTTCATTTCCCTCATTTCAATCCAAGTTCTGCAAAACCATAACTACCTATCCACAAATCACACGCGCACACGCGCCTCCTGCTCCTTCAACAGAAACCACCACTGCCTCATCCTTCCACGGTCTCTGCTACGTCGTTGGCGACAACATCGACACTGATCAGATCATCCCCGCCGAACATCTCACTCTCGTCCCTTCCAAGCCTGACGAGTACCAGAAGCTCGGTTCATTTGCCCTAATCGGACTCCCCGATTCGTACACCGTCCGGTTTGTAGAACCCGGTGAGACCAAAACGAAATACTCCATCATCATCGGCGGTGCCAATTTTGGCTGCGGATCTTCCCGTGAGCATGCTCCGGTGGCATTAGGTGCTTCCGGTGCTGCTGCTGTTGTGGCGGAATCCTATGCACGGATCTTTTTCCGGAACTCGGTGGCTACTGGTGAGGAAAACTGGCATGATTCCTACTCGATGAGAGAAAAGCCATGTTGGCATACTAGTAGGTGTTACGGGAGGTTGACTAGAACTGTTTGCCTGCGTTCACGGATTCAGTTCAGATTCTCTCCTCATGCAGCTTTGATTAAAATGAGTATTGTAACTTAA 702 0.4929 MAFFSSTATVPQNLTFVSSNKLSFSPSSTTSFNFVSFPSFQSKFCKTITTYPQITRAHAPPAPSTETTTASSFHGLCYVVGDNIDTDQIIPAEHLTLVPSKPDEYQKLGSFALIGLPDSYTVRFVEPGETKTKYSIIIGGANFGCGSSREHAPVALGASGAAAVVAESYARIFFRNSVATGEENWHDSYSMREKPCWHTSRCYGRLTRTVCLRSRIQFRFSPHAALIKMSIVT 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00236 233 Gene3D Aconitase, domain 4 67 182 IPR015928 -
Trre7g00236 233 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 69 181 - -
Trre7g00236 233 Pfam Aconitase C-terminal domain 134 181 IPR000573 -
Trre7g00236 233 SUPERFAMILY LeuD/IlvD-like 69 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00236 Trre-Chr7 1595679 1599460 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00236 K01704 - gmx:100809737 209.149