Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00226 ATGGCTAGTCTTCCAAGATCTGAAGTATCATTCAGAAGATCAGGTTCATCTGGTCTTGTTTGGGATGATAGATTCTTATCAGGAGAATTAAACAAAATCAATAAAGAACAAAAACAGAGCCAACAGAAGAAGAATAATTCCAAAGAGCTTCACGTTAAAACTACCATACAGAGAAGCAGCTCCACTGGTTCTAACCATGGATACCGTACTGGAAAAGTTTCTCCGGCGATTGAACCGCCATCTCCAAAAGTCTCTGCGTGTGGCTTCTGTGGTCCTTTTGGGAAAAAGGGTCAACGGTCAAAGCCTGGTAAACGTTGA 318 0.4182 MASLPRSEVSFRRSGSSGLVWDDRFLSGELNKINKEQKQSQQKKNNSKELHVKTTIQRSSSTGSNHGYRTGKVSPAIEPPSPKVSACGFCGPFGKKGQRSKPGKR 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00226 105 PANTHER OS05G0542732 PROTEIN-RELATED 1 101 IPR031421 -
Trre7g00226 105 MobiDBLite consensus disorder prediction 35 51 - -
Trre7g00226 105 MobiDBLite consensus disorder prediction 35 105 - -
Trre7g00226 105 Coils Coil 30 50 - -
Trre7g00226 105 Pfam Domain of unknown function (DUF4666) 1 100 IPR031421 -
Trre7g00226 105 MobiDBLite consensus disorder prediction 52 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00226 Trre-Chr7 1565674 1565991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00226 - - tpra:123921994 160.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04847 11 59504090 59504449 Trre7g00226 7 1565674 1565991 PCT