Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00213 ATGGCTTTGGCACGTCTGGCTTTGAGAAATTTACAGCAAAGGGTATCATCAACAGGGTCATTGCAAAAGCAATGCAACAGGTTGAGTAATAATAATAAGTTGGTAGCAAGGTTTTCAACTGCAGTTGGTGATAAGGGAAAATCTGAAGGTAGTGAAGTAGCTATCTCAGAAGATAACAAGTCAAGATTGTTCCCAAGGAGGAGGGGTAGAAGATGGCTTTCTAGAGGCTATGATCGTGACTTTCTTCCTGCTCCCTTTGAGCTATTTCCATCAGGTCTTGGAAATGCACTAATGCAAGCAACTCAAAACATCAACAAACTATTTGAAAACATGAATTTAACACCATGGTCATTAAGTGGACATGTGAAAGAAAGTGACAACCATTATAAACTAAAGTATGAAATGCCAGGGATCCCTAAAGAGGATGTGAAGATAACAATTGGTGATGGAGTGTTAACTATTAAGGGAGAACACAAAGAAGAGAAAGAAGAATCAAAGGATAATGATGATGATCATCATGAATATTGGTCATCTTATGGTTACTATAATACTAGTTTGGTTTTGCCTGATGATGCTAAGGTTGATGAAATTAAGGCTGAGTTAAAGGACGGTGTCTTAATTGTTACTATTCCTAGGAGTGAGAAGCCTAAAAAAGATGTTAAGCATGTGAATGTAGAGTGA 681 0.3759 MALARLALRNLQQRVSSTGSLQKQCNRLSNNNKLVARFSTAVGDKGKSEGSEVAISEDNKSRLFPRRRGRRWLSRGYDRDFLPAPFELFPSGLGNALMQATQNINKLFENMNLTPWSLSGHVKESDNHYKLKYEMPGIPKEDVKITIGDGVLTIKGEHKEEKEESKDNDDDHHEYWSSYGYYNTSLVLPDDAKVDEIKAELKDGVLIVTIPRSEKPKKDVKHVNVE 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00213 226 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 225 IPR044587 GO:0009408
Trre7g00213 226 Pfam Hsp20/alpha crystallin family 122 225 IPR002068 -
Trre7g00213 226 Gene3D - 80 226 IPR008978 -
Trre7g00213 226 CDD ACD_sHsps-like 122 212 - -
Trre7g00213 226 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 107 226 IPR002068 -
Trre7g00213 226 SUPERFAMILY HSP20-like chaperones 110 225 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00213 Trre-Chr7 1458348 1461193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00213 K13993 - gmx:100787482 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00213 7 1458348 1461193 Trre7g00213 7 1458348 1461193 ECH