Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00191 ATGGCTTTGATAACTTCTCAGCCTAAAAATCCCATTTTCTATAATCACTTTACAACCCTTCATTCTCCAATTCCACAATTCAATAGGTCCATTTTGAATTTTGGGCCATTCTCAAAAAATGAAAAAAACATTAAAGTTTGTAACTTTAACTCCAAGTCAAGAAATTTTCACTTGAAAAATAACCCCTTTAACTATAATCCACAAATTTTAGCTAAATCCAATGCTGCAATTGAAGAAGCTACTTTGGAGCAGCCAGAGGAAGATGTGCCATTGAAATATAGAAAGATTTTGCTATCTAATGTTGAAGTGAAGAGAGAAAGAGAAATTCTTTTTGGGAGGAAATGGAATTCATTGGATATTGGAACTTTTGTTATTGTTTTGTCAATGCATTTGTTATGCTTATTTGCTCCATTCAATTTCAATTGGCCAGCTTTTTGGGTTGCTGTTGCACTTTATGTGATTACTGGACTTTTTGGAATCACACTCTCTTTTCATAGGAATCTTTCTCATAGAAGTTTTAAGCTTCCTAAATGGCTTGAATATTTTTGTGCTTATTGTGGAGTTCTTGCTCTTCAGGGAAATCCAATTGATTGGGTGAGTACTCATAGGTATCACCACCAGTTTTGTGATTCTGAGAAGGACCCTCATAGCCCTATTGAAGGATTTTGGTTTAGCCATATGACTTGGCTATTTGATACCATTTCTATAGCAGAAAGGTGTGGAGAACCAACCAATGTTGGTGATTTAGAGAAACAGTCCTTTTATAGGTTTATCAGAAGCACTTATATGGTGCATCCATTTACTTTTGGAGTTCTTCTATATGCCATAGGTGGATTTCCTTTCCTTGTTTGGGGAATGGGGGTGAGAGCTGTGTGGGTTTACCATATCACTTGGTTTGTAAACTCAGCTTGCCATGTTTGGGGGAAGCAATCTTGGAACACAAGGGACTTATCTAGAAATAATTGGTGGGTGGCTTTGCTTTCATTTGGTGAAGGTTGGCACAATAACCACCATGCATTTGAGTATTCAGCAAGACATGGTTTAGAATGGTGGGAAATAGACATGACTTGGTACATGGTAAAATTTCTTCAAGCTATTGGTTTGGCAACTGAAGTTAAAGTACCAAGTGAGAGCCAAAAGCAGAAAATGGCATTTAATAATAATGACGTGATTGCCACATGA 1182 0.3672 MALITSQPKNPIFYNHFTTLHSPIPQFNRSILNFGPFSKNEKNIKVCNFNSKSRNFHLKNNPFNYNPQILAKSNAAIEEATLEQPEEDVPLKYRKILLSNVEVKREREILFGRKWNSLDIGTFVIVLSMHLLCLFAPFNFNWPAFWVAVALYVITGLFGITLSFHRNLSHRSFKLPKWLEYFCAYCGVLALQGNPIDWVSTHRYHHQFCDSEKDPHSPIEGFWFSHMTWLFDTISIAERCGEPTNVGDLEKQSFYRFIRSTYMVHPFTFGVLLYAIGGFPFLVWGMGVRAVWVYHITWFVNSACHVWGKQSWNTRDLSRNNWWVALLSFGEGWHNNHHAFEYSARHGLEWWEIDMTWYMVKFLQAIGLATEVKVPSESQKQKMAFNNNDVIAT 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00191 393 PRINTS Fatty acid desaturase family 1 signature 202 231 IPR015876 GO:0016717
Trre7g00191 393 PRINTS Fatty acid desaturase family 1 signature 165 185 IPR015876 GO:0016717
Trre7g00191 393 PRINTS Fatty acid desaturase family 1 signature 330 344 IPR015876 GO:0016717
Trre7g00191 393 PRINTS Fatty acid desaturase family 1 signature 287 308 IPR015876 GO:0016717
Trre7g00191 393 Pfam Fatty acid desaturase 145 360 IPR005804 GO:0006629
Trre7g00191 393 PANTHER ACYL-COA DESATURASE 82 385 IPR015876 GO:0016717
Trre7g00191 393 CDD Delta9-FADS-like 141 373 IPR015876 GO:0016717
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00191 Trre-Chr7 1339812 1342177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00191 48 388 Lipid Metabolism Gene Families AT3G15850 66.082 5.92e-173 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00191 K20416 - gmx:100527024 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00191 7 1339812 1342177 Trre7g00191 7 1339812 1342177 ECH