Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00180 ATGGCCCCAAAATCAGGGAAAGGGAAAACAAATAAAGCAAAGGCAGAGAAGAAGAAAAAGGAAGAGAAAGCAGTTGCACCTTCTCTTGTTGACATCATTGTGGTAACTCCTTTTGATTCACAAATTGTATTAAAGGGTATCTCTACTGATAAGATACTGGATGTGAGGAAACTATTGGCTGTAAAGGTGGAGACATGCCATTTTACAAACTATTCTTTATCTCATGAGGTTAAAGGTCAGAGATTAAATGACAGAGTTGAAGTTGTTACCCTAAAGCCATGTCTTCTAAGAATGGTTGAAGAGGATTATAATGATGAAATTCAAGCAATTACACACGTGCGAAGGCTATTGGACATAATTGCCTGCACAACAAGATTCGGAAAGCCCAAACGTAACTTACTAGGCCCAGATTCAAAGCCCAAGAAAAATGGAAAAGCCCAAAATCAAAACAAGAGCAGTGTGAGTCCACCCGCTACACCGAATGGTGAAATTCGGGTCGGGTCACCGTTGTCGGAGCCACCGGCATCGCCGATATCGGATAATGTCGGAATGGTTGCAATTCACCCGACGCCGAAGTTGTCAGATTTTTACGAGTTCTTTTCTTTCTCTCATCTCACTCCACCAATTTTACATTTGAAGAAATGTGAACTGAAGGATGAAGATGATAGACGTAAAGGAGATTATTTTCAGCTTCAGGTTAAAATCAGCAATGGGAAAGTGATAGAAGTGGTTGCTTCAGAGAAAGGCTTTTATAGTGTTGGAAAGCTGTCTCTGCAGAGTCACACATTGGTTGATCTTCTGCAACAGCTCAGCAGAGGTTTTGCTAACGCTTATGGATCATTGATGAAAGCTTTTTCGGATCGTAATAAGTTTGGCAATCTTCCATATGGACTCCGATCAAATACATGGCTTGTCGCTCCATCTGTTGGTGAATCTCTTTCAAACTTTCCAGCTCTACCTACTGAGGATGAAAATTGGGGTGGTAATGGTGGCGGCCAAGGAAGAAACGGTGAATATGATCATCGACCGTGGGCAACAGATTTTGCAATATTGGCTTCTCTTCCTTCCAAAACCGAGGAAGAGAGGGTGATCAGAGATCGAAAAGCTTTTCTACTTCACAATCAGTTTGTTGATACATCGATATTTAAGGCTGTTGCAGCTATACAGCATGTGATCGAGTCCAAGTCTAGTGTGAATTCTCCTTCGGGTTCTGTTCTGCATCAAGATCAAGTTGGAGACTTATCCATTGTAATCGAACGCGACAGAAATGGAAAGGTTGATTCTACACTGAATGAATCCAGTAAACCTAATGAGGATGCTCAGAAGAATTTAATCAAAGGGTTGTCTGCAGATGAAAGTGTCACTGTTAATGATACTTCTTCATTGTCTGTTGTTGTTGTTCACCACTGTGGATATACGGCAACAGTTAAGGCTGTGGGTAACGTGAATGCGAGGAAGCCTAAAGTTCAAGATATTGAAATAGATGATCAACCAGAAGGAGGCGCAAATGCTCTTAACATCAACAGTTTGAGGGTACTGCTTCACAAATCTGTAGCCGATTCATCAGAAGGGACTTTGACGTCCTTGTCAAATTTTGATGACTTGGATGCTTCTACGGATCTTGTTAGGAAGGTGGTTGAAGAATCCGTGGAAAAGATAAAGGAAGAGCCAAGTGTTTCAAAACGGTCTATTCGATGGGAACTTGGTTCTTCTTGGATGCAGCATCTGCAAAAACAGGAAAATTCTACCGATGTCGGTTCCAACAACAAGGATGGAAGTGAAGTTGAGCAAGCTGTGCAAGGTCTAGGAAAGCAATTTAAATTATTGAAGAAGAGGGAAAAGAAACCAAGTGACTTAAATGGTGCAGATTCTGTGGAGCAAAATAACGATGAGCCAAATAATGTTGAATCAAGTAGTTCTAATGAATTAGAGAAACTACTTTCTAAAGAAGCCTTTTTGCGTATCAAAGAATCCGGATCTGGTCTTCACATGAAGTCAGTGGACGAGCTTATCAACACGGCACACAAGTTTTATGATGAAGTTGCCCTGCCAAAGCTGGTTACGGATTTTGGATCACTTGAACTTTCTCCTGTGGATGGTCGTACCCTGACTGATTTCATGCATTTAAGAGGACTAAAGATGGGATCTTTGGGTGAAGTGGTTAAACTTGCAGAGAATCTTCCACACATACAATCCCTTTGCATTCATGAGATGATTACTCGAGCATTCAAGCATCTACTTAAAGCAGTTATTGCCTCTGTCAACAATGTAGTAGATTTACCTTCAGTCATTGCATCGACTCTGAATTTCTTACTTGGAACGTGTCGAACTGAAGATACGGACCAAACTTCGGGTGATGATCATAATCTCAGAATTGATTGGTTGCGTACATTTTTGTCAAAAAGATTTGGATGGATATTAAAAGATGAATTTCAACATTTGAGGAAGCTATCTATTCTAAGAGGGCTTTGTCACAAGGTTGGATTAGAATTGTTCCCCAGAGATTATGACATGGAGTCACCTAAGCCCTTTGGAAAATATGATATTATCAGTCTCGTTCCTGTTTGCAAGCATGTGGGGTGCTCCTCAATAGATGGACGCAATTTGTTGGAATCATCGAAAATAGCTCTTGATAAAGGAAAGCTCGAGGATGCTGTAAGCTATGGAACTAAGGCATTAGCGAAGATGATGACTGTTTGTGGTCCATATCATCGTAATACTGCAAGTGCGTATAGTCTTCTTGCTGTGGTTCTCTACCACACAGGAGATTTTAATCAGGCCACAATTTATCAGCAAAAGGCATTGGACATAAATGAGAGAGAGCTTGGACTTGACCATCCCGACACAATGAAAAGCTATGGGGATCTTTCTGTTTTCTATTATCGTCTGCAACATATTGAGCTGGCTTTGAAGTACGTTAATCGTGCTCTATTCCTCCTTCATTTCACGTGTGGTCTGTCTCACCCAAATACGGCGGCAACATATATAAATGTGGCTATGATGGAAGAAGGCATGGGAAATGTTCATGTTGCGCTTCGGTACCTGCATGAAGCTCTTAAATGCAACAAAAGATTGTTGGGAGCAGATCATATACAGACTGCGGCAAGCTATCATGCCATAGCCATAGCTCTTTCATTGATGGAAGCATACTCTCTGAGTGTCCAACATGAACAAACTACACTTAAGATACTTCAAGCGAAGCTTGGCGCAGAAGATCTTCGAACACAGGATGCTGCTGCATGGCTAGAATATTTTGAATCAAAAGCAATAGAGCAGCAAGAAGCGGCTAAAAATGGAACTCCAAAGTCAGATACATCCATTGCAAGTAAAGGTCACCTTAGCGTGTCAGATCTCCTGGATTTTATTAGTCCTGACAACGATTCAAAGGGAAATGACGCGCAACGGAAACAGAGGCGTCCAAAGATACTTCCAATAAGTGATAACAACGGTCAAGAACATGATGATGCTGCAACAGTGGATGATGCCGTTCTTGTTGACAACACAAAAGAAGCTGCAACAACGGTAAAAGGAAATGTAGAAGAAACAAAAGCCACACGTGATTCCAAGGAACCAAAAGAAATTGTTGATCTCAGCAGGCAGAAGCCGGTGGTTACAAGTGAAGCTGTTTACGAGACATCATCTGATGAAGGTTGGCAAGAAGCCAATTCAAAAGGGCGATCATCTAGTGCTGCTAACCGCAAGTCTGGACGCAGACAACGGCCTCTTCTATCGAAGCTCAGCGTTAACGGTTCTGATAATCACATTTACAAGGAAGCCAGCTATAGGAATGACACCTCTCCCCTGCCCCAAAAAGGAGCTCCTAAAGTAGCATCAGCTATGTTATCTCCACCTAGAAAATCGAAAACCCCAAAAGCTGTGTCGTCGAAAATTTCATCTACTCCAGCATCATTGAGTTCTTTGGCCTCAAAGTCTATATCTTACAAAGAAGTCGCTGCAGCACCACCAGGTACAGTTTTAAAGCCATTGTTGGAAAAAACGGAGATAGAGAAGGTAATTGATGACAATGAGATGCCAAAAAGTGAAGGTCCTATTCAAAGTCCTATAGCTGATACAGTTCCACAGCAAGATGAAAAAGAAGCAACAACTCAAGAAGATGAATCCGAACAAGAAAACTCTGCAGAACTTGAAAAGGTTTCGCTTTCTTCTGATCCGGCAAAGCCTTCAGAAACAAATGGAAGTAAGCTTTCTGCTGCAGCCAAACCCTTCAGTCCAGGAACATTGTCCGCGTCTCGCCATATAAATCCAGTTCCTCTCGCAAGCATATATGATGTAAATGGGAGTCAAGGCATTCTTGTGGAGCCTATCCTTCCTCCTCCTGCTGCTGCTCGAGTCCCTTGTGGGCCAAGATCACCACTGTATTACAGAACCAACTATACTTTCCGCATGAAACACGGTTCAACGAAGATAAGAGAAATAAGTGGATCAGGGGGTCCACGAATCATGAATCCACATGCTCCTGAGTTTGTTCCAAGAAGTGCTTCTCAAACAGAAATCGGTGAAGTCAAGAATAGTACTTCAAAAAACAGTCTTTCGGAATCTGAGAAGTCGGAGATAGCAAGGCAGATATTGCTGAGTTTTCTAGTGAAATCTGTTCATCAAAATGCTGATGCTGCGGATGAGCCTACAGTTAGTGAAAGAAAAGTTGAGAATTTTGAGAACTCTTCTGACGAAGTAGCTAAAGACAGTGCGGTCATAAAGATAATGTATGGTACTGAAGAAAATAACAAGACAGTGGTTAATTCCAGTGATGACATTGAAGAGCAAGAAAATAGTGAAGGATTTGTAGTTGTCACAAACAGGAGAAAAAACAGACAGAAAATTACAAATGGAGTCCCTGAATTGTACAACCAGCCATCAATATGTGCTTCGGTTCGCTGA 4899 0.4166 MAPKSGKGKTNKAKAEKKKKEEKAVAPSLVDIIVVTPFDSQIVLKGISTDKILDVRKLLAVKVETCHFTNYSLSHEVKGQRLNDRVEVVTLKPCLLRMVEEDYNDEIQAITHVRRLLDIIACTTRFGKPKRNLLGPDSKPKKNGKAQNQNKSSVSPPATPNGEIRVGSPLSEPPASPISDNVGMVAIHPTPKLSDFYEFFSFSHLTPPILHLKKCELKDEDDRRKGDYFQLQVKISNGKVIEVVASEKGFYSVGKLSLQSHTLVDLLQQLSRGFANAYGSLMKAFSDRNKFGNLPYGLRSNTWLVAPSVGESLSNFPALPTEDENWGGNGGGQGRNGEYDHRPWATDFAILASLPSKTEEERVIRDRKAFLLHNQFVDTSIFKAVAAIQHVIESKSSVNSPSGSVLHQDQVGDLSIVIERDRNGKVDSTLNESSKPNEDAQKNLIKGLSADESVTVNDTSSLSVVVVHHCGYTATVKAVGNVNARKPKVQDIEIDDQPEGGANALNINSLRVLLHKSVADSSEGTLTSLSNFDDLDASTDLVRKVVEESVEKIKEEPSVSKRSIRWELGSSWMQHLQKQENSTDVGSNNKDGSEVEQAVQGLGKQFKLLKKREKKPSDLNGADSVEQNNDEPNNVESSSSNELEKLLSKEAFLRIKESGSGLHMKSVDELINTAHKFYDEVALPKLVTDFGSLELSPVDGRTLTDFMHLRGLKMGSLGEVVKLAENLPHIQSLCIHEMITRAFKHLLKAVIASVNNVVDLPSVIASTLNFLLGTCRTEDTDQTSGDDHNLRIDWLRTFLSKRFGWILKDEFQHLRKLSILRGLCHKVGLELFPRDYDMESPKPFGKYDIISLVPVCKHVGCSSIDGRNLLESSKIALDKGKLEDAVSYGTKALAKMMTVCGPYHRNTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLKILQAKLGAEDLRTQDAAAWLEYFESKAIEQQEAAKNGTPKSDTSIASKGHLSVSDLLDFISPDNDSKGNDAQRKQRRPKILPISDNNGQEHDDAATVDDAVLVDNTKEAATTVKGNVEETKATRDSKEPKEIVDLSRQKPVVTSEAVYETSSDEGWQEANSKGRSSSAANRKSGRRQRPLLSKLSVNGSDNHIYKEASYRNDTSPLPQKGAPKVASAMLSPPRKSKTPKAVSSKISSTPASLSSLASKSISYKEVAAAPPGTVLKPLLEKTEIEKVIDDNEMPKSEGPIQSPIADTVPQQDEKEATTQEDESEQENSAELEKVSLSSDPAKPSETNGSKLSAAAKPFSPGTLSASRHINPVPLASIYDVNGSQGILVEPILPPPAAARVPCGPRSPLYYRTNYTFRMKHGSTKIREISGSGGPRIMNPHAPEFVPRSASQTEIGEVKNSTSKNSLSESEKSEIARQILLSFLVKSVHQNADAADEPTVSERKVENFENSSDEVAKDSAVIKIMYGTEENNKTVVNSSDDIEEQENSEGFVVVTNRRKNRQKITNGVPELYNQPSICASVR 1632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00180 1632 SUPERFAMILY TPR-like 874 977 IPR011990 GO:0005515
Trre7g00180 1632 MobiDBLite consensus disorder prediction 613 642 - -
Trre7g00180 1632 MobiDBLite consensus disorder prediction 1 20 - -
Trre7g00180 1632 MobiDBLite consensus disorder prediction 1339 1414 - -
Trre7g00180 1632 Pfam Tetratricopeptide repeat 991 1065 - -
Trre7g00180 1632 Pfam Tetratricopeptide repeat 907 977 - -
Trre7g00180 1632 CDD CLU-central 697 838 IPR033646 -
Trre7g00180 1632 MobiDBLite consensus disorder prediction 1503 1520 - -
Trre7g00180 1632 MobiDBLite consensus disorder prediction 1242 1256 - -
Trre7g00180 1632 Pfam Translation initiation factor eIF3 subunit 135 695 837 IPR033646 -
Trre7g00180 1632 MobiDBLite consensus disorder prediction 1381 1404 - -
Trre7g00180 1632 ProSiteProfiles TPR repeat profile. 908 941 IPR019734 GO:0005515
Trre7g00180 1632 MobiDBLite consensus disorder prediction 621 642 - -
Trre7g00180 1632 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 863 1113 - -
Trre7g00180 1632 MobiDBLite consensus disorder prediction 1180 1197 - -
Trre7g00180 1632 MobiDBLite consensus disorder prediction 1121 1158 - -
Trre7g00180 1632 MobiDBLite consensus disorder prediction 1205 1235 - -
Trre7g00180 1632 MobiDBLite consensus disorder prediction 1177 1308 - -
Trre7g00180 1632 Pfam Mitochondrial function, CLU-N-term 49 120 IPR028275 -
Trre7g00180 1632 MobiDBLite consensus disorder prediction 142 159 - -
Trre7g00180 1632 MobiDBLite consensus disorder prediction 575 594 - -
Trre7g00180 1632 Gene3D Tetratricopeptide repeat domain 867 1115 IPR011990 GO:0005515
Trre7g00180 1632 MobiDBLite consensus disorder prediction 1288 1308 - -
Trre7g00180 1632 ProSiteProfiles Clueless (Clu) domain profile. 322 587 IPR025697 -
Trre7g00180 1632 MobiDBLite consensus disorder prediction 1482 1520 - -
Trre7g00180 1632 SMART tpr_5 992 1025 IPR019734 GO:0005515
Trre7g00180 1632 SMART tpr_5 908 941 IPR019734 GO:0005515
Trre7g00180 1632 SMART tpr_5 950 983 IPR019734 GO:0005515
Trre7g00180 1632 MobiDBLite consensus disorder prediction 130 177 - -
Trre7g00180 1632 SUPERFAMILY TPR-like 945 1063 IPR011990 GO:0005515
Trre7g00180 1632 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 6 1389 IPR027523 GO:0006996
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00180 Trre-Chr7 1273274 1284604 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00180 K03255 - gmx:100801625 2324.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00180 7 1273274 1284604 Trre7g00180 7 1273274 1284604 ECH