Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00179 ATGCATTCACCAACATATAGACCCGACCCGACAACACCACCAAACACAACCTTCATACAAGCAGACCCATCCAATTTCCGACAAGTAGTCCAAAAATTAACCGGAGCATCACAAGACCCATCAGCCCAAAAACTACCCATCACTCTACCATCTCGTCTAACAGCCCAAACCCAAGCCCAACGTCCACCACCAACCACCAACGAACCAACAACAATGGGCCCAAAAAAACCCAACTTTAAACTCCACGAACGCCGCTCCAAAAAACTTCAACTCAACGTTTCGGAAACACCCATGATGTTCCAAAACAACAACAACAATAACATGATGATGATGATGTTAATGAATAACAACAACAACAATAATATTAATCGAAGTGTTGTTATGGCTTCACCAGTTTCACCATTGGAATTTTACATGGCGCGTGGAAATAGTCCAAAATCACCATATGAAGATGAAGAAGATGAAGAAGAAAAAGTGATAGCTGAAAAAGGTTTCTATTTACACCCCTCTCCAAGAGCTTCTCAACAACCACCTGAACTGTTGCCACTTTTTCCTTTGCATTCTCCTTCATCTCAATCTCATTCTTAA 588 0.415 MHSPTYRPDPTTPPNTTFIQADPSNFRQVVQKLTGASQDPSAQKLPITLPSRLTAQTQAQRPPPTTNEPTTMGPKKPNFKLHERRSKKLQLNVSETPMMFQNNNNNNMMMMMLMNNNNNNNINRSVVMASPVSPLEFYMARGNSPKSPYEDEEDEEEKVIAEKGFYLHPSPRASQQPPELLPLFPLHSPSSQSHS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00179 195 MobiDBLite consensus disorder prediction 1 21 - -
Trre7g00179 195 Pfam VQ motif 13 40 IPR008889 -
Trre7g00179 195 MobiDBLite consensus disorder prediction 168 195 - -
Trre7g00179 195 MobiDBLite consensus disorder prediction 34 66 - -
Trre7g00179 195 MobiDBLite consensus disorder prediction 34 83 - -
Trre7g00179 195 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 7 192 IPR039611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00179 Trre-Chr7 1266696 1267283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00179 - - tpra:123921526 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00179 7 1266696 1267283 Trre7g00179 7 1266696 1267283 ECH