Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00178 ATGTCTAAAGAAGATGTTTTCATTGGAGCAATTGATCAAGGAACAAGTAGTACCAGGTTCATAATATATGACAAATCTGCTAAATCAATTGGATCTCATCAGGTTGAGTTCACTCAATTCTATCCGCAAGCAGGGTGGGTGGAGCATGATCCAATGGAGATATTGGAGAGTGTGAAGGTTTGTATTGCTAAGGCTGTGGACAAGGCAACAGCCGATGGATTCAATGTTGATAAAGGGTTGAAGGCTATTGGTCTCACCAATCAAAGAGAGACCACTCTTGTTTGGAGCAAATCTACTGGCGCTCCTCTTCACAATGCCCTTGTTTGGATGGATGTTCGTACTTCGTCTGTTTGCAGGAGACTTGAAAAGGAGTTATCGGGCGGCAGAACTCACTTTGTGGAGAGTTGTGGTTTGCCGATCAGCACATATTTCAGTGCTTTGAAGCTTCTTTGGTTGATGGAAAACGTAGATGCTGTCAAGGAAGCAATTAAGAAAAAGGATGCATTGTTTGGAACAATAGACACTTGGTTGATATGGAACTTAACCGGCGGGGTGAAAGGAGGATTGCATGTCACCGATGTTTCAAATGCATCCCGAACAATGCTGATGAACCTGAAAACTCTAAACTGGGATGAATCCACTTTGAAATCACTTGCAATCCCTCCTGAAATGTTGCCAAAGATTATCAGTAATTCAGAGGTCATAGGAAACGTCGCTGCTGGATGGCCAATTCCCGGTATCCCTATCTCTGGATGTTTAGGCGATCAACATGCGGCAATGCTTGGACAAGCGTGCCGTAAAGGTGAAGCCAAAAGTACTTATGGAACAGGTGCTTTCATTCTCCTGAATACCGGAGAAGCTGCAGTTCAATCTAAGCACGGCCTTCTATCAACCATAGCCTATAAGCTTGGTCCCAATGCTCCAACCAACTATGCACTCGAGGGATCTGTTGCTATTGCTGGAGCTGCAGTGCAGTGGCTTAGAGACAACCTTAGTTTCGTTTCAAATGCTGCAGAGATAGAGGCTCTGGCATTAGAGGTTGAATCGAACGGCGGTGTTTACTTCGTTCCCGCTTTCAATGGATTGTTTGCTCCTTGGTGGCGTGATGATGCTCGCGGTGTTTTAATTGGAATTACAAGGTATACTAACAAGGGTCATATTGCTCGAGCTGTGCTAGAGAGCATTTGTTTTCAAGTGAAAGATGTCATAGATTCCATGCACAAAGATTCTGGAGCAGATCAATCCAAGAAAGATGAATTCTTGCTTAGGGTTGATGGTGGAGCAACTGTTAACAACTTGTTGATGCAGACTCAGGCGGATTTGTTGGCAACTCCAGTAATTAGACCTACTGACATCGAAACAACGGCACTTGGAGCAGCCTATGCAGCTGGATTAGCAGTTGGTGTTTGGAAAGAAGATTACATTTTTGATTCAAAGGATAGGCTGAAAAATGCAAATATTTTCCGTCCTTTAATGGCTGAAGATTCTAGGAAAAAGAAAGCAGATTCTTGGTCCAAAGCTGTTAGTAGATCTTTTGACTTGGCTGATCTTACTCTTTAA 1560 0.434 MSKEDVFIGAIDQGTSSTRFIIYDKSAKSIGSHQVEFTQFYPQAGWVEHDPMEILESVKVCIAKAVDKATADGFNVDKGLKAIGLTNQRETTLVWSKSTGAPLHNALVWMDVRTSSVCRRLEKELSGGRTHFVESCGLPISTYFSALKLLWLMENVDAVKEAIKKKDALFGTIDTWLIWNLTGGVKGGLHVTDVSNASRTMLMNLKTLNWDESTLKSLAIPPEMLPKIISNSEVIGNVAAGWPIPGIPISGCLGDQHAAMLGQACRKGEAKSTYGTGAFILLNTGEAAVQSKHGLLSTIAYKLGPNAPTNYALEGSVAIAGAAVQWLRDNLSFVSNAAEIEALALEVESNGGVYFVPAFNGLFAPWWRDDARGVLIGITRYTNKGHIARAVLESICFQVKDVIDSMHKDSGADQSKKDEFLLRVDGGATVNNLLMQTQADLLATPVIRPTDIETTALGAAYAAGLAVGVWKEDYIFDSKDRLKNANIFRPLMAEDSRKKKADSWSKAVSRSFDLADLTL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00178 519 FunFam Glycerol kinase 264 514 - -
Trre7g00178 519 PIRSF GlpK 5 518 IPR000577 GO:0005975|GO:0016301
Trre7g00178 519 Gene3D - 3 263 - -
Trre7g00178 519 SUPERFAMILY Actin-like ATPase domain 265 512 IPR043129 -
Trre7g00178 519 ProSitePatterns FGGY family of carbohydrate kinases signature 1. 143 155 IPR018483 GO:0005975|GO:0016773
Trre7g00178 519 PANTHER SUGAR KINASE 7 513 - -
Trre7g00178 519 SUPERFAMILY Actin-like ATPase domain 8 265 IPR043129 -
Trre7g00178 519 Pfam FGGY family of carbohydrate kinases, C-terminal domain 270 466 IPR018485 GO:0005975|GO:0016301
Trre7g00178 519 Gene3D - 264 514 - -
Trre7g00178 519 FunFam Glycerol kinase 5 263 - -
Trre7g00178 519 NCBIfam glycerol kinase GlpK 7 512 IPR005999 GO:0004370|GO:0006072
Trre7g00178 519 Pfam FGGY family of carbohydrate kinases, N-terminal domain 8 262 IPR018484 GO:0005975|GO:0016301
Trre7g00178 519 ProSitePatterns FGGY family of carbohydrate kinases signature 2. 373 393 IPR018483 GO:0005975|GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00178 Trre-Chr7 1251290 1254238 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00178 K00864 - gmx:547750 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00178 7 1251290 1254238 Trre7g00178 7 1251290 1254238 ECH