Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00144 ATGCGACGCGGTTCATCAAAGAAAACGGGTCAATCCAATTCCAATCCCTCCGCCGCGGATCTCTTCCGTTCCGCTTCAAGTAAAGCAAATTCAAAGGAACTGGAGCGAATTGATAGTCTATTTTATTCATATGCCAATGGATCTTCCGGGTTGATTGATCCAGAAGGAATTGAAGCACTTTGTGCTGATATGGAGGTGGATCATACTGATTTGAGGATTTTGATGCTTGCGTGGAAAATGAAAGCTGAGGAGCAGGGATATTTTACCCTGGATGAGTGGAGGAGAGGCTTAAAAGCACTAAGGGCTGATACAGTAAGTAAATTGAAGAAGGCACTTCCAGACCTAGAAAAGGAGGTCAGGAGACCGTCAAATTTTTCAGATTTCTATTCATATGCTTTCCAATATTGTCTAACAGAGGAGAAGCAGAAAAGCATTGATATAGAGAGCATTTGTGAATTACTTACTCTTGTTTTGGGCTCGACATTTCCAACCCAAGTTAGCTTATTTGTGGACTATTTGAAGAATCAAAATGATTACAAGGTTGTAAACATGGACCAGTGGATGGGATTTTTCCGGTTTTGCAATGAGATAAGTTTTCCGTCGCTTAATGACTATGATCCTGAACTTGCATGGCCCTTAATTCTGGATAATTTTGTGGAGTGGTTACGAGAAAAACAAAAGTAA 684 0.405 MRRGSSKKTGQSNSNPSAADLFRSASSKANSKELERIDSLFYSYANGSSGLIDPEGIEALCADMEVDHTDLRILMLAWKMKAEEQGYFTLDEWRRGLKALRADTVSKLKKALPDLEKEVRRPSNFSDFYSYAFQYCLTEEKQKSIDIESICELLTLVLGSTFPTQVSLFVDYLKNQNDYKVVNMDQWMGFFRFCNEISFPSLNDYDPELAWPLILDNFVEWLREKQK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00144 227 FunFam Defective in cullin neddylation protein 122 227 - -
Trre7g00144 227 Gene3D - 30 120 - -
Trre7g00144 227 Pfam Cullin binding 107 221 IPR005176 -
Trre7g00144 227 Coils Coil 226 227 - -
Trre7g00144 227 MobiDBLite consensus disorder prediction 7 24 - -
Trre7g00144 227 FunFam Defective in cullin neddylation protein 30 120 - -
Trre7g00144 227 ProSiteProfiles DCUN1 domain profile. 32 223 IPR005176 -
Trre7g00144 227 Gene3D Cullin, PONY binding domain 122 227 IPR042460 -
Trre7g00144 227 SUPERFAMILY EF-hand 27 190 IPR011992 -
Trre7g00144 227 PANTHER RP42 RELATED 7 227 IPR014764 -
Trre7g00144 227 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00144 Trre-Chr7 984090 987656 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00144 K17824 - gmx:100776788 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00144 7 984090 987656 Trre7g00144 7 984090 987656 ECH