Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00143 ATGTTGCTTTGTGGAAAGAGTTCAAGAAACGGCGTCGTTTTGGGATCGGTGCCGGTGTACCTTAACGTGTACGATCTGACACAATTCAACGGTTACGCTTACTGGTTTGGTCTTGGAGTTTATCATTCCGGTGTTCAAGTTCATGATGTTGAATATGCTTTTGGGGCACATGAGCATGCATCAACCGGAATATTTGAAGGAGAACCAAAGAAATGTGAAGGGTTCAGATATAGGAAAACAATATTGATTGGAAAAACAGATAAGGATATTGATGAAGTGAGGAATTTGATGGTTGAGCTTGCTGCTGAGTACAAAGGAAATGCTTACAATCTCATTACAAAAAATTGTAACCATTTTTGTGATGATGCTTGTGTTAGGCTCACTGGAAATTCTATACCTAGTTGGGTTAATCGTCTTGCTAAGATTGGTTTTATGTGCAATTGTGTTTTACCCGTGACATTGAATTCAACCAAAGTTAGACATCATCATAGAATAGAAGACAAACAATGTGAAGATGAGAAACAATCCAAACAATCATTAACACATGAACAACCAAACAAGGTTACTATTTCAAATTCAACACCTTCAAGAACATCTTCACCGGCTTCTACTAGTTCTGGATTAAGAAGGGGAAGGAGTAGAACCAGACGTCCTCTTCCTCCCCCTTCACCTTTGATTAATTGTTCCCCGTCATCTTGA 699 0.3891 MLLCGKSSRNGVVLGSVPVYLNVYDLTQFNGYAYWFGLGVYHSGVQVHDVEYAFGAHEHASTGIFEGEPKKCEGFRYRKTILIGKTDKDIDEVRNLMVELAAEYKGNAYNLITKNCNHFCDDACVRLTGNSIPSWVNRLAKIGFMCNCVLPVTLNSTKVRHHHRIEDKQCEDEKQSKQSLTHEQPNKVTISNSTPSRTSSPASTSSGLRRGRSRTRRPLPPPSPLINCSPSS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00143 232 MobiDBLite consensus disorder prediction 181 209 - -
Trre7g00143 232 MobiDBLite consensus disorder prediction 166 180 - -
Trre7g00143 232 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
Trre7g00143 232 MobiDBLite consensus disorder prediction 217 232 - -
Trre7g00143 232 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Trre7g00143 232 PANTHER DESUMOYLATING ISOPEPTIDASE 16 196 IPR008580 GO:0008233
Trre7g00143 232 Gene3D PPPDE domains 15 172 IPR042266 -
Trre7g00143 232 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Trre7g00143 232 MobiDBLite consensus disorder prediction 166 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00143 Trre-Chr7 976872 980024 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00143 K22763 - gmx:100796813 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00143 7 976872 980024 Trre7g00143 7 976872 980024 ECH