Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00093 ATGGCTGCTGCTGCTACTAGTGTTGGTGTTTTTGGTGGTAATGGATCTTCTGTTTCTTGGATGCAATTTAGAAGAAATGAAAAGAAACAAAATAAGATGAACAAATTTAGGGTTTCTTGCTCTAATTCTTCTGTTATGGATCCTTATAAGACATTGAGAGTTCAACCAGGTGCTTCTGAATCTGATGTTAGAAAGGCTTTTAGAAAGCTTGCTTTGCAGTACCATCCAGATGTGTGCAGAGGGAGAGATTGTGGTGTGCAGTTTCACCTAATCAACGAGGCTTATGATGTTGTGATGACAAATTTGAGAGAAGAAGAAACAAATGCACAAGAAACCTGTGAGACCTATACATATGAAGAACCAGATTATGACTATTGGGAAGAGTGGTCTGGTTGGGAAGGTGCAGGAGGAATCCGTGATTACTCTAATCCATATGCAGTGTAA 444 0.3941 MAAAATSVGVFGGNGSSVSWMQFRRNEKKQNKMNKFRVSCSNSSVMDPYKTLRVQPGASESDVRKAFRKLALQYHPDVCRGRDCGVQFHLINEAYDVVMTNLREEETNAQETCETYTYEEPDYDYWEEWSGWEGAGGIRDYSNPYAV 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00093 147 PRINTS DnaJ domain signature 83 103 IPR001623 -
Trre7g00093 147 PRINTS DnaJ domain signature 49 67 IPR001623 -
Trre7g00093 147 PRINTS DnaJ domain signature 67 82 IPR001623 -
Trre7g00093 147 FunFam chaperone protein dnaJ 8, chloroplastic 21 108 - -
Trre7g00093 147 ProSiteProfiles dnaJ domain profile. 47 127 IPR001623 -
Trre7g00093 147 Pfam DnaJ domain 47 100 IPR001623 -
Trre7g00093 147 CDD DnaJ 47 97 IPR001623 -
Trre7g00093 147 Gene3D DnaJ domain 19 110 IPR036869 -
Trre7g00093 147 SUPERFAMILY Chaperone J-domain 43 135 IPR036869 -
Trre7g00093 147 SMART dnaj_3 46 103 IPR001623 -
Trre7g00093 147 PANTHER CO-CHAPERONE PROTEIN DJLA 38 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00093 Trre-Chr7 622112 623301 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00093 - - gmx:100780336 183.726