Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00073 ATGGCTACAATAGCAACATGTTATTTACATCCCAAAAATTCAAAACCTTTTTCACAATTCACTACAAACCCACTATCCATTCCTTCAACTTATCCAACCCATGTTTCATTATTAACTTCATTAGACAATCCATCACATTTACATTGTTCCAATTCAACTCGAAGATCAAATGTTCGAGTAAATGCCAAAAAGAACAATCCATGGCTTGACCCTTTTAATGACGGAGAAGACCCGAACATGGAATATGGTTCCTTGTTTGCAGACGGTAAACAAGACGAGGATTCAAGGCCACCGGATGATCCAAATAATCCTTATGGATTCTTGAAATTTCCACCTGGTTATACAGTTGAGATAGCTTCTTTGGGATTGAAAGTTAGAGGTGATGTTAGGAGATGTTGTTGTGTGATATCCGGCGGTGTTTATGAGAATTTGTTGTTTTTTCCAACTATACAGTTGATTAAGGATAGGTATCCTGGTGTTCAGATTGATGTTGTGGGTTCTGAGAGAGGGAAACAGTGTTATGAGTTGAATAAGAATGTTAGATGGGCTAATGTTTTTGATCCTGATGATGAATTTCCTGAGCCTGCTGAATATACTGATTTTGTTGGTGTTTTGAAGAGTAGGTACTATGATATGGTCTTAAGCACAAAATTGGCAGGAATTGGCCATGCAGCATATTTATTCATGACAACTGCTCGAGATAGAGTTAGTTATGTCTACCCAAATGTGAATGCTGCAGGAGCAGGATTGTTTCTCTCTGAAACATTCACACCTGATAGTCCAAATCTTTCAGAGGGAGGATATCATATGTATCATCAGATGGAAGACTGGCTAGGTAAACCATTTCGAAGCGTTCCAAGGCAGGTTGTGCCACCACTTAAAATATCACTTTCAAGGAAGTTAAAGGAAGTTGTGGAGGAGAAATACACAAAAGCAGGCGTAAAGAAAGGAAGATATGTTGTGATTCATGGGATACAATCAGACTCAAAGGCCTCAATGCAGTCTAGGGGTGATCCTGATAGCTTGCTACCCCTTGAAGTATGGGCTGAAATTTCTGATGCTGTAAGGGAATTTACGCCACTTTTTGTCATTCCACATGAGAAAGAAAGGGAAAATGTTGAGGAAATTGTCGGAGAAGATTCCTCCATAATATTCATCACCACCCCTGGACAGTTGGCTGCTCTTATTAATGACTCAGCTGGAGTGATAGCTACCAATACAGCCGCAATTCAGCTAGCAAACGCGCGCGAAAAACCTAGTGTTGCTCTATTTGGCTCTCAAGAGAAGGGAAACAAGTTTGTTCCGCGTGCTGAAGAGAAGAAATGCATTGTGGTATCATCGAAGACGGGGAAGTTGATTGATATAGATGTTGAGGCTGTAAAAAATGCAATTGAAACTTTCAATGTCTCTCTAGCTTTTGCTTAG 1425 0.3993 MATIATCYLHPKNSKPFSQFTTNPLSIPSTYPTHVSLLTSLDNPSHLHCSNSTRRSNVRVNAKKNNPWLDPFNDGEDPNMEYGSLFADGKQDEDSRPPDDPNNPYGFLKFPPGYTVEIASLGLKVRGDVRRCCCVISGGVYENLLFFPTIQLIKDRYPGVQIDVVGSERGKQCYELNKNVRWANVFDPDDEFPEPAEYTDFVGVLKSRYYDMVLSTKLAGIGHAAYLFMTTARDRVSYVYPNVNAAGAGLFLSETFTPDSPNLSEGGYHMYHQMEDWLGKPFRSVPRQVVPPLKISLSRKLKEVVEEKYTKAGVKKGRYVVIHGIQSDSKASMQSRGDPDSLLPLEVWAEISDAVREFTPLFVIPHEKERENVEEIVGEDSSIIFITTPGQLAALINDSAGVIATNTAAIQLANAREKPSVALFGSQEKGNKFVPRAEEKKCIVVSSKTGKLIDIDVEAVKNAIETFNVSLAFA 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00073 474 Gene3D Glycogen Phosphorylase B; 143 279 - -
Trre7g00073 474 Pfam Glycosyltransferase family 9 (heptosyltransferase) 344 445 IPR002201 GO:0016757
Trre7g00073 474 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 143 467 - -
Trre7g00073 474 MobiDBLite consensus disorder prediction 64 104 - -
Trre7g00073 474 Gene3D Glycogen Phosphorylase B; 304 471 - -
Trre7g00073 474 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 1, CHLOROPLASTIC 13 474 IPR044983 GO:0009507|GO:0009773|GO:0010598
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00073 Trre-Chr7 515484 518627 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00073 - - gmx:100802136 770