Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00072 ATGTCGGGTCCACCGAGAGTTCGATCTATGAATGTGACTGTTGGAGATTCTGATTCCCTTCCCGCTGGGAACAAAGCTCGTCCTGTTAAGACAGTGAAGAAACCGTTGCCGGAAACGGAGAAGAAGAAGAATTTGGATGTGGTTATGAACTCACAATGTGTGTTGGTTACTCCGGCAATTTCAAAGCGGAGGGATCAACATAAACTGGCTGGAGTGAAAAACCTGTCGATGTATGCTTCGTGTTCATCCGATGCTTCTTCGACGGATTCTTCAACTTACAGCAGTGGTGCTTCGTCGAGCCGGAAGGTAGCGAGGCATGTGAGGAAGAAGCAAGTTGGTTTGAAGATTGAGAAGGTGAGGATTGATGCTTTGGCTGTTCCTGTTGAGGTGGATTTGATTGATGGCTTTGAGGGCAAGAAAAGGTGTGCTTGGATTACACCAAATACAGAGCCATGTTATATTGCTTTTCACGATGAAGAGTGGGGAGTTCCTGTTCACGACGACAAGAAACTGTTTGAGTTGCTCAGCTTCTCTGGAGCCTTGGCAGAACTCTCTTGGCCAGCCATTCTTGGCAAAAGGCAGTTATTTCGGGAAGTATTTTTGGATTTCGATCCATGTGCTGTTTCAAGAATGAATGAGAAGAAGATAGTTGCACCAGGAAGTCCTGCCAGCTCATTGCTGTCAGAGCTCAGGCTGCGTTCCATAATTGAAAATGCACGTCAGATGTGTAAGGTAATAGAAGAGTTTGGTTCCTTTGACAACTATATTTGGAACTTTGTGAACAACGAGCCTATAGTCAGCCAATTCCGGTACCCGCGCCAGGTACCTGCCAAATCTCCAAAAGCAGAATTCATAAGTAAAGACCTCTTAAAGAGAGGATTCAGGAGTGTGGGACCGACCGTAATCTACACTTTCATGCAAGTGGCTGGGCTAACAAATGACCACCTTATCAGTTGCTTCAGATTCAAGGAGTGTGTCTTCTCTAATGCAGAAGCAGAAGTCAAAGAGAGCAGCTCCCTCAACTCTAAGGTCAAAGAGAAGTCAAGTGAGGATTCAACCAACGTTGGTCTGTTGCTTGCTGTGAACAAGTTGAGCTTCTCCTCTTAG 1107 0.4571 MSGPPRVRSMNVTVGDSDSLPAGNKARPVKTVKKPLPETEKKKNLDVVMNSQCVLVTPAISKRRDQHKLAGVKNLSMYASCSSDASSTDSSTYSSGASSSRKVARHVRKKQVGLKIEKVRIDALAVPVEVDLIDGFEGKKRCAWITPNTEPCYIAFHDEEWGVPVHDDKKLFELLSFSGALAELSWPAILGKRQLFREVFLDFDPCAVSRMNEKKIVAPGSPASSLLSELRLRSIIENARQMCKVIEEFGSFDNYIWNFVNNEPIVSQFRYPRQVPAKSPKAEFISKDLLKRGFRSVGPTVIYTFMQVAGLTNDHLISCFRFKECVFSNAEAEVKESSSLNSKVKEKSSEDSTNVGLLLAVNKLSFSS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00072 368 Pfam Methyladenine glycosylase 148 321 IPR005019 GO:0006284|GO:0008725
Trre7g00072 368 SUPERFAMILY DNA-glycosylase 140 326 IPR011257 GO:0003824|GO:0006281
Trre7g00072 368 Gene3D Hypothetical protein; domain 2 139 322 - -
Trre7g00072 368 PANTHER OS04G0501200 PROTEIN 20 331 - -
Trre7g00072 368 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00072 Trre-Chr7 510158 513951 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00072 K01246 - gmx:100805836 496.893