Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00057 ATGGACTACAGCTCTGAAGAAGAGTCAGATATCAGTGAATCTGAAATTGAGGAGTACTCAGAGAAACCTTACACCCAATTAAAAGATGGAAATTACAAGGTGAAGAATTTCAATGGCACACTTCGGTGCCCATATTGTGCTGGAAAGAAGAAGCAGGAATTCAAATATAAGGATTTGCTGCAACATGCATCTGGAGTTGGTAAAGGTTCGGCAAACAGAAGTGCAAAACAAAAGGCCAACCACCTTGCTCTGGCAAAGTATTTGGAAACCGACTTAGTCAATGAAGCGGATCAAATACCTCAACCAGCATTGATCCAAAATGTCAACCAACCTGCCCAGCCAGTTGAGAATTACGTCTGGCCATGGACAGGCATTATTGTTAACATCAAGAGCAATTTACAGGATTCTGCATACTGGCTAAAGGAATTTTCCAAGTACAAACCATTGAATTTTCATATATTCTTGGTGGATGGTGATGCTCAGGCTGTAATTGACTTCAATAATGACTGGAACGGTTTCATGAATGCAAGTGAGTTTGAGAAATCCTTTGAAACTAAACATCATGGAAAAAAGGATTGGAATTCAATGGACTTGCAGGCCAGTTCAAACATTTATGGATGGGTTGCACGTGAAGACGATTATAACTGTGGAGGGCCAATAGGGGAGTACCTTCGCAACAAAGGAAGGCTGAGGACAATTTCAGATATTGTTCAAGAAGCATCTGAAAGCAGAAATAGCATTGTTGAAAACCTTGCAAATGAAATTGATATTACAAATGAAAACCTCAACAAAATGCAGTACAAGTATAATGAGAAGACTATGTCCTTAAGTAGGATGCTGGAGGAGAAAGACAAGCTACACAATGCTTTTGTGGAAGAGTCAAGGAGTATGCAGCGTAAAGCTCGTGAGGAGGTACGCAGGATCTTGGAAGAACAGGAAAAGATGAGTAATGATTTGGATGAAAAAATGCGGAAGCTTGATTCCTGGAGTAGAGATCTGAATAAACGTGAGGTACTAACTGATCAAGAGAGGCAGAAACTTGATGAGGACAAGAAGAAGAAAGACCTGAGGAATGAATCGCTCCAGTTGGCTTCAAAGGAGCAGAAGATAGCTGATGCTAATGTCTTCAAGCTTGTCGAAGAGCAAAAGAGAGAAAAAGAAGAGGCCTTAAACAAGATCCTTCAATTGGAGAAGCAGCTAGACGCCAAACAAAAGTTAGAGATGGAAATTGAGGAGTTAAGAGGAAAATTGCAAGTTATGAAACATCTTGGTGATCAAGATGATGCAGCTATCAAGAAAAAAATGGAAGAAATGACTGAAGAATTGACTGACAAAATAGAAAGTTTGGAGGATATGGAGTCAATGAATCAAACCCTCATTGTCAAGGAGCGCCAAAGCAATGATGAACTACAGGAAGCTCGTAAAGAATTAATAGAAGGGTTAAATGCAATGCTGACCCGTCCTAAAGCTACTAATATTGGGACCAAGAGAATGGGAGAGCTTGACGAGCAGGTGTTTGTGAATGCCTGCAAGAAAAGATATTTTGAAGAAGGTGGGGTAAAGGGCATGGAGCTTTGCTCTTTTTGGCAGGAGAATGTGAAGGATCCAGCTTGGCATCCTTTTAAAGTGATCAGAGAGAATGATACCCATGTGTCAGTTATAGATGAGGAAGATGAGAAATTAAAAAAACTCAAGCAGGAATGGGGAGATGAGGTATACTCAGCTGTTGTAACAGCCGTGAAAGAAGTAAATGAATACAATCCAAGTGGAGGATATTCTGTTTGGGAGCTATGGAATTTCAAGGAAAAGAGGAAGGCAACTTTGAAAGAAGTTATAACTTATATTGTGGAACAGATGAAACAGCTTAAGCGCAAGAGAGGATAG 1884 0.4018 MDYSSEEESDISESEIEEYSEKPYTQLKDGNYKVKNFNGTLRCPYCAGKKKQEFKYKDLLQHASGVGKGSANRSAKQKANHLALAKYLETDLVNEADQIPQPALIQNVNQPAQPVENYVWPWTGIIVNIKSNLQDSAYWLKEFSKYKPLNFHIFLVDGDAQAVIDFNNDWNGFMNASEFEKSFETKHHGKKDWNSMDLQASSNIYGWVAREDDYNCGGPIGEYLRNKGRLRTISDIVQEASESRNSIVENLANEIDITNENLNKMQYKYNEKTMSLSRMLEEKDKLHNAFVEESRSMQRKAREEVRRILEEQEKMSNDLDEKMRKLDSWSRDLNKREVLTDQERQKLDEDKKKKDLRNESLQLASKEQKIADANVFKLVEEQKREKEEALNKILQLEKQLDAKQKLEMEIEELRGKLQVMKHLGDQDDAAIKKKMEEMTEELTDKIESLEDMESMNQTLIVKERQSNDELQEARKELIEGLNAMLTRPKATNIGTKRMGELDEQVFVNACKKRYFEEGGVKGMELCSFWQENVKDPAWHPFKVIRENDTHVSVIDEEDEKLKKLKQEWGDEVYSAVVTAVKEVNEYNPSGGYSVWELWNFKEKRKATLKEVITYIVEQMKQLKRKRG 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00057 627 Coils Coil 432 487 - -
Trre7g00057 627 MobiDBLite consensus disorder prediction 1 15 - -
Trre7g00057 627 MobiDBLite consensus disorder prediction 1 22 - -
Trre7g00057 627 Pfam XS zinc finger domain 43 85 IPR005381 GO:0031047
Trre7g00057 627 Coils Coil 339 359 - -
Trre7g00057 627 Pfam XH domain 496 625 IPR005379 -
Trre7g00057 627 Gene3D XS domain 112 270 IPR038588 -
Trre7g00057 627 Pfam XS domain 116 215 IPR005380 GO:0031047
Trre7g00057 627 Coils Coil 248 268 - -
Trre7g00057 627 PANTHER RIBONUCLEASE P SUBUNIT P38 3 626 IPR045177 GO:0080188
Trre7g00057 627 Coils Coil 291 325 - -
Trre7g00057 627 Coils Coil 547 567 - -
Trre7g00057 627 Coils Coil 379 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00057 Trre-Chr7 413685 416987 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00057 - - gmx:100798940 963.37