Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00054 ATGGAGGTACCTACTTCTTGGGATTCTCTTCGAAAACAGGCAAGAAAACTTGAAGCTCAATTGGACGAGCAGATGAGTGCTTATCGTAAATTAGTTTCTACCAATGTTTCGACAAAAGGTGATGCTGCAGAGAGTGATGTAGAGTCTTGGATTGAGCGGTTAATAAAACAACTCCAACAAGTAAACTCACAGATGCAAGTTTTGGTATCATCTGGTGGTTCAGATATGGTTTCTCACACTTTGACTAGACACCAAGAAATTCTTCATGATATCAGTCAGGAGTTTTATCGTCTTCGCTCAAGTCTTCGAGCTAAGAAAGAACATGCTTCACTTTTAGATAATTTTAAAGAATTTGATCGGACAAGATTAGATTTGGAAGAGGGTGGCGAATCTGAACAGCATACACTCCTAAAAGAGCATGCATCTATCAGTCGAAATACTGGACATGTGGACAATGTAATTTCACAAGCACAAGCAACACTAGGGGCACTTGTCTTCCAGCGTTCAACATTTGGTGGCATCAATTCAAAGCTCAGCAACGTGAGCAGTCGCCTCCCTACGGTAAATAACATACTCTCGGCAATAAAGCGAAAAAAGTCAATGGACACCCTTATACTTTCCCTAGTTGCATCTGTATGCACATTTCTGATTTTGATTTACTGGATAACCAAATGA 675 0.4015 MEVPTSWDSLRKQARKLEAQLDEQMSAYRKLVSTNVSTKGDAAESDVESWIERLIKQLQQVNSQMQVLVSSGGSDMVSHTLTRHQEILHDISQEFYRLRSSLRAKKEHASLLDNFKEFDRTRLDLEEGGESEQHTLLKEHASISRNTGHVDNVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPTVNNILSAIKRKKSMDTLILSLVASVCTFLILIYWITK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00054 224 Coils Coil 7 34 - -
Trre7g00054 224 PANTHER GOS-28 SNARE- RELATED 4 222 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
Trre7g00054 224 PIRSF Golgi_SNARE 1 223 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
Trre7g00054 224 Pfam Snare region anchored in the vesicle membrane C-terminus 136 199 - -
Trre7g00054 224 Coils Coil 51 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00054 Trre-Chr7 385158 388693 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00054 K08495 - gmx:100797885 374.015