Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00019 ATGGATTTTTTGAAGATTAAGAAATTCAGGAAATCTCAAAAAGCAGGTGTAGAAAAAGATTTGGTAGATAGGGCAGTGCCGGAGCCTGAAGAATCGAGGCCTAACACTGGTGATCCTGATCAGTATAAATCAGAAAATGCAGATTCTGCTGCCGATGCTGAGGACGACGATGATTTTATTACCAATGAGGTAAAGAGGAGGTTCAAGGAATTGAGAAGAAACAGTTTTATGGTGTTGATTCCTGAAGAAGATTCATGTCTGGAGGAAGGGGAGGATGAAGAGGAAGACGGTGAGACAGTCTCAAATGAATGGAGGGATGTGGAGGCAGAAGGTCAGCAATGGTGGCGAGGCTTTGATGCTGTTTTTGAAAAGTACTCTGAAAGAATGCTATTCTTTGATCGGATGAGCGCACAGCATCTTGGTGAAATCGGAAAAGGCTCTTTGAACACTTCAACTCCATCTCCAAGATCTACATCAAAGAAGCTGGCATCTCCCCTTCGGTGTCTTTCCTTGAAAAAATTTGAAGAACCTGATGATGAGACTGAACATCTTCAACAGCCTGAAAATAATCCCTACTTGGATATTGAAACGGCATATGTAGGGCAAATTTGCTTGACTTGGGAGGCTCTTCATTGTCAATACTGTCATATGAGTTATAAGATATCTTGGCAACATGAAAATCCTACCTGTTACAACCGTAGTGCGCAGGAGTTTCAACAGTTCCAAGTTCTATTGCAAAGGTTTATTGAAAATGAACCTTTCGAGCAGGGCCTTCGACCTGAAATTTATGCTCGCACAAGGAACACTTTGCCTAAACTTCTTCAGGTTCCTAACATACGAGGCTCAGATCAGGAATTAACAGATGAGTCAGATATGAGAGTTCTTGCTCCAGATCTTATCAGGATAATTGAAAACTCTATTCTTACTTTCCACCTTTTCCTGAAAAGGGACAAGAAAAAGTCAAGCGGTGTTATCAACCTGTTTGGAAATCAGAACCAGCTTGCAACTCCTCTACAACAGGTTCAGTCTACTCTTGAGAAGAAAGTGGCGAAACTAAAGGAACTGCGAAAGAGGAAGAAGGGTTGGAGAAAAAGTTCTTGGCCCCAAAAGCACGAGGACATTCAACTATTACTTGGCCTAATTGACGCGAAAATCCTATCCAGGGTTCTGAGAATGACGAGGATGACTAGAGAACAACTGTTTTGGTGTGAAGAAAAGATGAAAAAACTTGATTTATCAAATAGTAGGTTAGAGAGGGATCCATGTCCCATTCTCTTCCCTTGCTAG 1287 0.4165 MDFLKIKKFRKSQKAGVEKDLVDRAVPEPEESRPNTGDPDQYKSENADSAADAEDDDDFITNEVKRRFKELRRNSFMVLIPEEDSCLEEGEDEEEDGETVSNEWRDVEAEGQQWWRGFDAVFEKYSERMLFFDRMSAQHLGEIGKGSLNTSTPSPRSTSKKLASPLRCLSLKKFEEPDDETEHLQQPENNPYLDIETAYVGQICLTWEALHCQYCHMSYKISWQHENPTCYNRSAQEFQQFQVLLQRFIENEPFEQGLRPEIYARTRNTLPKLLQVPNIRGSDQELTDESDMRVLAPDLIRIIENSILTFHLFLKRDKKKSSGVINLFGNQNQLATPLQQVQSTLEKKVAKLKELRKRKKGWRKSSWPQKHEDIQLLLGLIDAKILSRVLRMTRMTREQLFWCEEKMKKLDLSNSRLERDPCPILFPC 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00019 428 PANTHER DNA LIGASE (DUF1666)-RELATED 28 428 - -
Trre7g00019 428 MobiDBLite consensus disorder prediction 144 163 - -
Trre7g00019 428 Pfam Protein of unknown function (DUF1666) 194 427 IPR012870 -
Trre7g00019 428 MobiDBLite consensus disorder prediction 1 38 - -
Trre7g00019 428 Coils Coil 338 365 - -
Trre7g00019 428 MobiDBLite consensus disorder prediction 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00019 Trre-Chr7 167052 169367 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00019 - - gmx:100804417 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00019 7 167052 169367 Trre7g00019 7 167052 169367 ECH