Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00003 ATGAGCGCCTCGGTCTCAACGGTAATTTTGTATTCAAAGTATACTACTACTGCTGCACTTCTCTCATCGGATCTTCGAGGCTTCAACAATCCTTCATTTCAAAGGAAGAAGCATCGTCGTCGCTATGTACTACGGGCTGCTGCTCCCAATACAGACAACAAGAACGAAAATGCCCAAAACGACGAACAGTCTTCTTCTTCTTCTCCCGTCTCCCTCAGTCTTGATGACGTGAATCCCGTGGGACTGGGTCGAAGATCGCGACAGTTATTCGATGAGGTTTGGAGAAAATTCTCGGGATTGGGTCAAATCTCAAGGACTATCCGCACCGATGATCAGGATGCCCTTCTAGTCGGTGAAAGCGGCCCTATGTGCGAGTTCGCTATCCCTGGTGCTCAGAATACTACCGTCCTCGTTGTTGGTGCCACCAGCCGCATCGGCCGCATAGTTGTTCGTAAGCTCATGCTCAGGGGTTACTCCGTCAAGGCTTTGGTACGCACTTCAGATGAAGAATCTGTACAGCTTCTTCCAAGGTCAGTTGAGATTGTGATTGGGGATGTTGGTGATCCCACCACTGTCAAGGCTGCCGTTGAAGGCTCCAACAAAATTATATATTGTGCCACTGCTCGCTCTACTATTACTGCTGATCTCTTCAGGGTTGATCATCAAGGTGTTTATAACTTATCTAAAGCATTTCAGGATCACAATAATAAATTGGCTCAGTTGCGTGCTGGCAAAAGCAGCAAAAGTAAGCTTATGGTGGCTAAATTCAAATCTGAATCTTCCCTGAATGGATGGGAAGTTCGTCAAGGAACTTACTTCCAAGATGTAGTTACTACAAAATATGATGGAGGGATGGATGCCAATTTTGAGTTCACTGAGAATGGGGATGCTGTTTTCTCAGGTTATGTCTTCAATAGAGGTGGCTATGTAGAACTGTCAAAAAAGCTTTCTCTACCATTGGGTTGTACTCTTGATAGGTATGAGGGATTGGTTCTCTCTGTTGGTGGCAATGGAAGATCTTATGTATTAATTCTAGAAGCCGGTCCTTCAGGGGATCCAAGTCAGAGTAAATTGTATTTTGCAAGAATTAGTACAAAAGTGGGATTTTGTAGGGTTAGAGTGCCATTTTCATCATTCCGCCCTGTGCAACCAGATCATCCAGTTTTAGATCCTTTTCTTGTACATACATTAACAATACGGTTTGAGCCTAGAAGACAGAGGCCTACTGAAGTAAATGCCACAAAGAACCAGGATTTGAGAAGCTTTAAGCTAATATTGGAATATATAAAAGCCTTGCCTACTGGACAAGAAACCGATTTTGTCTTAGTTTCATGTTCTGGCCTAGGTATCGAGCCATCCAGGCGGGAGCAAGTTCTTAAAGCCAAGAGGGCAGGTGAAGATTCCTTGAGAAAATCTGGCCTTGGATATACAATAGTTCGTCCGGGTCCATTGCAGGAAGAACCTGGTGGGCAGCGTGCTCTAATATTTGATCAAGGAAACAGAATATCTCGGGGAATCAGCTGTGCTGATGTGGCTGATATATGTGTGAAAGCACTCCATGATTCAACAGCAAGAAACAAAAGCTTTGATGTATGTTACGAGTATGTTGCTGAGGATGGAATGGAGCTTTATGAGCTGGTTGCCCACTTGCCTGACAAAGCAAATAACTACCTGACACCAGCTCTCTCTGTCTTAGAGAAGAATACCTGA 1710 0.4439 MSASVSTVILYSKYTTTAALLSSDLRGFNNPSFQRKKHRRRYVLRAAAPNTDNKNENAQNDEQSSSSSPVSLSLDDVNPVGLGRRSRQLFDEVWRKFSGLGQISRTIRTDDQDALLVGESGPMCEFAIPGAQNTTVLVVGATSRIGRIVVRKLMLRGYSVKALVRTSDEESVQLLPRSVEIVIGDVGDPTTVKAAVEGSNKIIYCATARSTITADLFRVDHQGVYNLSKAFQDHNNKLAQLRAGKSSKSKLMVAKFKSESSLNGWEVRQGTYFQDVVTTKYDGGMDANFEFTENGDAVFSGYVFNRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAGPSGDPSQSKLYFARISTKVGFCRVRVPFSSFRPVQPDHPVLDPFLVHTLTIRFEPRRQRPTEVNATKNQDLRSFKLILEYIKALPTGQETDFVLVSCSGLGIEPSRREQVLKAKRAGEDSLRKSGLGYTIVRPGPLQEEPGGQRALIFDQGNRISRGISCADVADICVKALHDSTARNKSFDVCYEYVAEDGMELYELVAHLPDKANNYLTPALSVLEKNT 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00003 569 Pfam Complex I intermediate-associated protein 30 (CIA30) 283 383 IPR013857 -
Trre7g00003 569 MobiDBLite consensus disorder prediction 50 74 - -
Trre7g00003 569 SUPERFAMILY Galactose-binding domain-like 252 391 IPR008979 -
Trre7g00003 569 Gene3D - 131 275 - -
Trre7g00003 569 Gene3D - 391 544 - -
Trre7g00003 569 PANTHER FLAVIN REDUCTASE-RELATED 131 552 - -
Trre7g00003 569 MobiDBLite consensus disorder prediction 46 77 - -
Trre7g00003 569 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 133 534 IPR036291 -
Trre7g00003 569 Pfam NAD(P)H-binding 456 521 IPR016040 -
Trre7g00003 569 Pfam NAD(P)H-binding 140 236 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00003 Trre-Chr7 29564 37428 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00003 - - tpra:123923048 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00003 7 29564 37428 Trre7g00003 7 29564 37428 ECH