Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05999 ATGCAGCACTTAGATTTTGAGTCGGTTCAAACTGAAAGGCCAGGAGAGTTAATTGCTTACTACAAGATTGCACGTCATTACAAGTGGGCTCTAGGCCAACTGTTCGACAAGCATAACTTCAGCCGAGTCATCATTCTTGAAGATGACATGGAAATAGCACCTGATTTCTTTGATTACTTTGAAGCTATGGCAACTCTCCTTGACAAGGATAAGTCCATTATGGCTGTTTCGTCGTGGAATGACAATGGACAGAGGCAGTTTGTACATGATCCATATGAACTTTATCGCTCGGACTTCTTTCCTGGACTAGGATGGATGCTGACTAGATCTACATGGAATGAACTATCACCAAAATTAAAAGAGAATCACAAAGGACGCCAGTTTATCCGACCCGAAGTATGCAGAACATATAATTTTGGAGAACATGGTTCTAGTTTGGGACAGTTTTTTAAGCAGTATCTTGAGCCAATCAAGCTGAATGAGGTCCAGGTCGACTGGAAGTCAATGGACTTGAGCTATTTGTTGGAGGACAAATATGCTATACACTTTGCCAACAATATTAAAAACGCTAAACCTGTCTCTGGAGCAGACATCGTTCAAAAGGCACACAATATAGACGGTGATGTGCGTATAAAGTATAAAGATCAGTGGGACTTTGAAAACATTGCTCAACAATTTGGTATATTTCAAGAGTGGAAGGATGGCGTGCCTAGGGCAGCTTATAAAGGAGTAGTCGTTTTCAGATATCAAACCACAAGGCGTATATTCCTTGTTGGTCCAGAATCTTTGAAGCTACTTCAGATTGAAGATTTGGATTCTTAA 822 0.4063 MQHLDFESVQTERPGELIAYYKIARHYKWALGQLFDKHNFSRVIILEDDMEIAPDFFDYFEAMATLLDKDKSIMAVSSWNDNGQRQFVHDPYELYRSDFFPGLGWMLTRSTWNELSPKLKENHKGRQFIRPEVCRTYNFGEHGSSLGQFFKQYLEPIKLNEVQVDWKSMDLSYLLEDKYAIHFANNIKNAKPVSGADIVQKAHNIDGDVRIKYKDQWDFENIAQQFGIFQEWKDGVPRAAYKGVVVFRYQTTRRIFLVGPESLKLLQIEDLDS 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05999 273 FunFam Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase 1 154 - -
Trre5g05999 273 SUPERFAMILY Nucleotide-diphospho-sugar transferases 16 268 IPR029044 -
Trre5g05999 273 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 154 IPR029044 -
Trre5g05999 273 PANTHER PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 264 - -
Trre5g05999 273 Pfam GNT-I family 1 268 IPR004139 GO:0006486|GO:0008375
Trre5g05999 273 Gene3D - 191 268 - -
Trre5g05999 273 FunFam Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase 193 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05999 Trre-Chr5 59233651 59238772 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05999 1 270 Glycosyltransferase AT4G38240 77.778 1.76e-162 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05999 K00726 - gmx:100795005 498.434