Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05995 ATGGAATTGGTTTACTCGCCTCCTGTTTGGGCAACTATAATTGCCGCCGCCTTTCTTCTTACCACTATTACTCTCTCCGTCTATCTTCTATTTGAGCATCTTTCCGCATACAAGAATCCCGAGGAGCAGAAGTTCTTGATTGGAGTTATTCTCATGGTTCCCTGCTACTCTATTGAATCTTTTGTATCCTTGGTGAATCCATCAATCAGTGTTGACTGCGAGATACTGAGGGATTGCTACGAATCATTTGCCATGTATTGCTTTGGAAGATACCTTGTTGCCTGCCTTGGCGGCGAGGAAAGGACTCTCGAGTTTATGGAAAGAGAAGGTCGCGCTACTTTTAAAACTCCTCTTCTCCACCATTCTTCTCACTGTGGCATTGTTAACCATCCTTTTCCTCTCAAATACTTCCTTAAGCCCTGGAAACTTGGTCCCCGCTTTTACCAAATTGTCAAATTTGGTATTGTTCAATATATGATCATCAAATCTTTCACTGCTATTTTGGCCGTAATCCTTGAAGCCTTTGGGGTCTACTGTGAAGGAGAATTTAAATTAGGATGTGGGTATCCTTATGTGGCAGTGGTTCTGAATTTCAGTCAATCTTGGGCATTGTACTGCCTTGTCCAATTTTATACTGTTACAAAGGAGGAATTGGCTCATATAAAGCCATTGGCCAAATTTTTGACATTTAAATCAATTGTGTTTCTCACTTGGTGGCAAGGTGTGGCAATTGCTCTCCTATATACGTTTGGTTTGTTCAAAAGTCCAATAGCACAGGGCTTGCAGTTTAAGTCAAGTGTCCAAGATTTCATCATTTGCATTGAGATGGGCATTGCTTCCATAGTTCACCTGTATGTATTTCCAGCAAAGCCTTATGAGCTAATGGGAGACTGCCTTCCGGGAAGTGTTTCAGTTCTGGGAGATTACTCTGCTGATTGTCCTCTTGACCCTGATGAGATTAGAGACAGCGAGAGACCCACAAAACTGCGTCTTCCTGCACCTGATGTTGATGCCAAGAGTGGAATGACAATTAGAGAGAGTGTTCGTGATGTTGTTATTGGTGGTGGTGGATATATTGTGAAAGACGTGAAGTTCACAGTCCATCAAGCAGTGGAGCCTGTGGAAAAGGGAATCACTAGATTCAATGAAAAACTATACAAGATATCCCAAAACATTAAAAAGCATGACAAAGATAAAAGAAGAATCAAGGATGACAGTTGCATCGTGTCATCATCACCTGCAAGGAGGGTGATTCGAGGAATCGATGATCCCCTCTTGAATGGGAGCGTCAGTGATGGTGGGATGTCAAGGGGAAAGAAGCACCGTCGGAAATCTGGACATACGAGTGCAGAGAGTGGTGGAGAAAGCAGTAGTGATCAAACCTACGGGGGCTACCAGGTTAGGGGCCATAGGTGGGTTACCAAAGAGTAA 1431 0.4326 MELVYSPPVWATIIAAAFLLTTITLSVYLLFEHLSAYKNPEEQKFLIGVILMVPCYSIESFVSLVNPSISVDCEILRDCYESFAMYCFGRYLVACLGGEERTLEFMEREGRATFKTPLLHHSSHCGIVNHPFPLKYFLKPWKLGPRFYQIVKFGIVQYMIIKSFTAILAVILEAFGVYCEGEFKLGCGYPYVAVVLNFSQSWALYCLVQFYTVTKEELAHIKPLAKFLTFKSIVFLTWWQGVAIALLYTFGLFKSPIAQGLQFKSSVQDFIICIEMGIASIVHLYVFPAKPYELMGDCLPGSVSVLGDYSADCPLDPDEIRDSERPTKLRLPAPDVDAKSGMTIRESVRDVVIGGGGYIVKDVKFTVHQAVEPVEKGITRFNEKLYKISQNIKKHDKDKRRIKDDSCIVSSSPARRVIRGIDDPLLNGSVSDGGMSRGKKHRRKSGHTSAESGGESSSDQTYGGYQVRGHRWVTKE 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05995 476 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 8 441 IPR005178 -
Trre5g05995 476 MobiDBLite consensus disorder prediction 420 476 - -
Trre5g05995 476 Pfam Organic solute transporter Ostalpha 12 292 IPR005178 -
Trre5g05995 476 SMART Solute_trans_a_2 11 292 IPR005178 -
Trre5g05995 476 MobiDBLite consensus disorder prediction 450 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05995 Trre-Chr5 59201159 59206893 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05995 - - gmx:100807030 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05995 5 59201159 59206893 Trre5g05995 5 59201159 59206893 ECH