Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05994 ATGGCTATGCTGAGGCTACCGACGGCTACACCCGCTGTTAATGGGGCGAGAGTGAGACAGTGGAAGAGTGAGGGATTATTATTATTTCCTAATGTTGAGGTTTGTGGTGGAAGGAGTAGCAGCAGGAGTATTATTATTAGAAGAGCGGGAGTGAAATGCAGTAGTAGTAGTAGTGGTGGTGGATCATCATCATCATCGGCGGTGGTTAATCTTGGGGATGGGACACCTGTTAGGTCAACGAATATACTGGTGGTTGGAGCGACGGGTACTCTGGGAAGGCAGATTGTTAGGAGGGCACTGGACGAAGGATACGATGTTAGGTGCCTGGTAAGGCCTCGGCCTGCTCCAGCTGACTTCCTTAGGGATTGGGGAGCAACTGTCGTTAATGCCGACCTTACTAAACCTGAGACTATTCCTGCTACATTGGTTGGCGTTCATACTGTTATTGATTGCGCCACAGGCCGTCCTGAAGAACCCATCAAAACCGTTGACTGGGAAGGTAAAGTTGCTCTTATACAATGTGCCAAAGCTATGGGTATTCAGAAATATGTTTTCTATTCCATCCACAACTGTGACAAACATCCTGAGGTCCCACTCATGGAGATCAAGTATTGTACCGAGAACTTCCTCCGTGATTCTGGACTCAATCACATTGTCATCCGCTTATGTGGTTTCATGCAAGGTCTTATCGGCCAGTATGCCGTTCCTATCTTGGAAGAAAAATCTGTTTGGGGAACTGACGCCCCAACCAGAATCGCTTACATGGACACTCAGGATATAGCTCGCTTGACTTTTATAGCATTGCGAAATGAAAAGTTCAATGGTAAACTTCTTACATTTGCCGGTCCTCGTGCGTGGACAACCCAAGAGGTGATAACATTGTGCGAGAGGCTTGCAGGCCAAGATGCTAATGTAACTACAGTTCCCGTCTCCGTTTTAAGACTTACTCGTCAGTTGACTCGCTTTTTTGAGTGGACAAATGATGTTGCTGACAGATTGGCATTTTCAGAGGTGCTTACGAGTGACACAATTTTCTCTGTTCCGATGGCGGAGACATACAATCTGCTTGGAGTGGATACAAAAGATATAATTACATTAGAGAAGTATCTGCAGGACTACTTCACAAACATATTGAAGAAGTTGAAGGATCTTAAAGCTCAGTCAAAGCAGTCGGATATTTTCTTCTGA 1188 0.4554 MAMLRLPTATPAVNGARVRQWKSEGLLLFPNVEVCGGRSSSRSIIIRRAGVKCSSSSSGGGSSSSSAVVNLGDGTPVRSTNILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLTKPETIPATLVGVHTVIDCATGRPEEPIKTVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTENFLRDSGLNHIVIRLCGFMQGLIGQYAVPILEEKSVWGTDAPTRIAYMDTQDIARLTFIALRNEKFNGKLLTFAGPRAWTTQEVITLCERLAGQDANVTTVPVSVLRLTRQLTRFFEWTNDVADRLAFSEVLTSDTIFSVPMAETYNLLGVDTKDIITLEKYLQDYFTNILKKLKDLKAQSKQSDIFF 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05994 395 FunFam uncharacterized protein ycf39 isoform X1 81 371 - -
Trre5g05994 395 PANTHER - 61 395 IPR044256 -
Trre5g05994 395 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 82 384 IPR036291 -
Trre5g05994 395 Gene3D - 81 350 - -
Trre5g05994 395 CDD SDR_a5 81 284 - -
Trre5g05994 395 Pfam NmrA-like family 82 303 IPR008030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05994 Trre-Chr5 59189802 59191945 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05994 - - gmx:100797608 639.032