Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05990 ATGCCGAAAAAGATGGGAGTGAATTCTAAGGCCGAGGTGGCCAGGGCTCGGAAGACCGCAGCGGAAACGGAGAAAAAGGAGAGGGAGACTCGAGAGAAGGAGGAACAGTACTGGCGAGAGGCGGAGAGTTCAAAGCCACGCGCCGCCAAGAAAAGAGAAGAAGAGGCAGATAAGAAGGCTGAGGCGGCGGCACGGCGAGCGGAGGTGCGTCGATTGGCGGAGTTGGAGGAGAAAGAGCTTGAGAAGATGATTAAAAAACCGGACAAGAAGGCGAACAGGGTGTCGATCCCTGTACCGAAGGTGACGGAGGCGGAGCTGAGGAAGCGGCGCGAGGAGGAGCAGGCTCTGGCTCAGAAGAAGGCGGAGGAGTCGAATAAGCGCACGGCTGCGGAGGAGGAATACGAGAGAGTGGTGCTTGTCTCGAATACGAATCGCGATGATTCGATAATCGAAGCAAGTACTCTTGACGAAGCCATCGCTAAGATGAGCATCGATAACAACTTACCCCCGGACAGGCATCCTGAGAAGCGCCTCAAGGCTTCCTTCAAGGCATTTGAAGAAGCTGAACTCCCTAAGTTGAAAGAAGAGAAACCGGGGCTTACTTACAGACAATACAAGGACATGATTTGGAAGCTTTGGAAAAAATCTCCTGACAATCCTCTTAATCAAATTGCTGCTGCCGCTGCCGCTGCTGAGTGA 699 0.5336 MPKKMGVNSKAEVARARKTAAETEKKERETREKEEQYWREAESSKPRAAKKREEEADKKAEAAARRAEVRRLAELEEKELEKMIKKPDKKANRVSIPVPKVTEAELRKRREEEQALAQKKAEESNKRTAAEEEYERVVLVSNTNRDDSIIEASTLDEAIAKMSIDNNLPPDRHPEKRLKASFKAFEEAELPKLKEEKPGLTYRQYKDMIWKLWKKSPDNPLNQIAAAAAAAE 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05990 232 Pfam Coiled-coil domain-containing protein 124 /Oxs1 142 223 IPR010422 -
Trre5g05990 232 Coils Coil 103 133 - -
Trre5g05990 232 MobiDBLite consensus disorder prediction 1 64 - -
Trre5g05990 232 MobiDBLite consensus disorder prediction 15 64 - -
Trre5g05990 232 Coils Coil 13 36 - -
Trre5g05990 232 MobiDBLite consensus disorder prediction 104 134 - -
Trre5g05990 232 Coils Coil 50 86 - -
Trre5g05990 232 PANTHER UNCHARACTERIZED 1 229 IPR010422 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05990 Trre-Chr5 59150095 59150997 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05990 - - gmx:100781326 266.929