Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05976 ATGAGCGCGGTGAACATCACCAACGTCACTGTCCTCGACAACCCTGCTTCCTTTCTCAATCCCTTTCAGTTCGAGATTTCCTACGAGTGTTTGGCTGCTCTCAAAGATGATTTGGAGTGGAAGCTCATTTATGTTGGATCTGCTGAGGATGAGACTTATGATCAATTGCTAGAGAGTGTGCTTGTTGGTCCTGTCAATGCAGATCCACCAGACCCGTCCAAGATTCGTGAAGAAGATATAATTGGTGTTACCGTGCTTCTGCTGACCTGCTCTTATTTGGGTCAAGAGTTTATCCGTGTTGGTTATTATGTCAACAATGACTATGATGATGAGCAGCTGAGAGAGGAACCTCCAACTAAGGTTTTAACTGACAGGGTTCAAAGGAACATTTTATCTGATAAACCAAGGGTTACAAAGTTCCCCATCAATTTCCACCCTGAGAACAATGAAAATGAAGAGCAACCACCTCCATCGGAGCAACAACCTGAAACTGGAGAAGATCCACTGACCTTGGCTGATCGTGATCCCCCAAATGAGGGGGATAAGTGA 549 0.4499 MSAVNITNVTVLDNPASFLNPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLTDRVQRNILSDKPRVTKFPINFHPENNENEEQPPPSEQQPETGEDPLTLADRDPPNEGDK 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05976 182 MobiDBLite consensus disorder prediction 168 182 - -
Trre5g05976 182 SUPERFAMILY ASF1-like 1 144 IPR036747 GO:0005634|GO:0006325
Trre5g05976 182 MobiDBLite consensus disorder prediction 144 165 - -
Trre5g05976 182 MobiDBLite consensus disorder prediction 137 182 - -
Trre5g05976 182 Pfam ASF1 like histone chaperone 1 144 IPR006818 GO:0005634|GO:0006325
Trre5g05976 182 PANTHER ANTI-SILENCING PROTEIN 1 1 162 IPR006818 GO:0005634|GO:0006325
Trre5g05976 182 Gene3D - 1 148 IPR036747 GO:0005634|GO:0006325
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05976 Trre-Chr5 59066271 59067518 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05976 K10753 - gmx:100801694 319.316