Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05970 ATGGAGGAAGGCACGACGGAGTCATCGCCATCGCCATCGCCATCGCCATCATCATGTGAGAAGAAGAAGACCAATACTACGACGATGCGGCGACCATCTTTAAAATCCGATTCTGAATTCAACAATCACCAATTCTGGAAACAAAAGTTGAGAGAGAATTGCTTGAAAAGGGTGCGAGAGGACAGAACTCGCTTGCTCTGGAAATGTAGGTCTTCCTCTTCGCCCCCAACCTCACACAACTTTCATCAGGATCACTTGGATATTGCATTCCGGGATATTGTATCCCATGAATTCCATCAAATTATCAAACACCATAATCATAATGATGATGATGATGATGATGATCTCCTATGGAACGATCAAGCACCTCATACCACATACCAGGATGATTGCCAAGAGATACTGCTTCAAATGCAAGAAATATTTTACCAAGAAACTGCAATTGATACTTGGGAAGATGAAGTGGATAACTACTTGGCTCGTGCAGTTTACGAGCATATGGATTTAAATGCAGATAAGACACGCGGAAAACAGATTTGGTGTCCTGTTTGTAAGCAAGGAGAGCTTAAAGACACTCACACTCTCATATACTGCACTCGTTGTAAACTTCAACTAAACAAAGCTGGAGAGCTTACGTTGGACTTTTTGTGTGACCGGCTTGCCGAAGCCCATACGGATCATCTTGACAGAGGCTGCAGATTAAAACCCACATTTTGTATAAAGACCGAATTTAATTTAACTGCACTATACATCATGTGCGAAGGTTGCAATACATTTGAGGTTGTAATATAA 792 0.4179 MEEGTTESSPSPSPSPSSCEKKKTNTTTMRRPSLKSDSEFNNHQFWKQKLRENCLKRVREDRTRLLWKCRSSSSPPTSHNFHQDHLDIAFRDIVSHEFHQIIKHHNHNDDDDDDDLLWNDQAPHTTYQDDCQEILLQMQEIFYQETAIDTWEDEVDNYLARAVYEHMDLNADKTRGKQIWCPVCKQGELKDTHTLIYCTRCKLQLNKAGELTLDFLCDRLAEAHTDHLDRGCRLKPTFCIKTEFNLTALYIMCEGCNTFEVVI 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05970 263 PANTHER RPA-INTERACTING PROTEIN RPAIN 20 263 IPR028156 -
Trre5g05970 263 MobiDBLite consensus disorder prediction 1 37 - -
Trre5g05970 263 Pfam Replication protein A interacting N-terminal 43 72 IPR028158 -
Trre5g05970 263 Pfam Replication protein A interacting middle 89 155 IPR028155 -
Trre5g05970 263 Pfam Replication protein A interacting C-terminal 180 261 IPR028159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05970 Trre-Chr5 59045659 59048648 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05970 - - psat:127086453 373.244