Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05968 ATGGAGTTGGCACAACTTGAAGCATTGTGTGAGAGACTTTACAATTCACAGGACTCAGTTGAACGGGCTCATGCGGAGAATACACTTAAATGCTTCTCTATGAACACTGAATACATTTCCCAATGCCAATACATTCTTGATCATGCTTTGACACCTTATGCATTGATGCTTGCTAGTTCTAGTTTGTTGAAACAAGTCACCGAACATAGCCTTGCTCTCAAGCTCCGTCTAGATATATGGGCTTACCTCCTCAACTATCTAGCAACCAGAGGACCTGAGTTACAACCGTTTGTCACTGCTTCTCTGATCCAACTTTTGTGTCGAGTCACCAAATTTGGATGGTTTGATGATGACAGATTCCGGGACTTGGTCAAAGAATCAATGAACTTCTTGAGTCAGGCAACACCAGGTCATTATGCCATTGGTTTGAAGATGCTAAATCAGCTTATTTCTGAGATGAATCAGGCTAATGCTGGTTTACCTGCAACAAAGCATCGAAGGGTAGCTTGTTCCTTCAGGGATCAATCTCTTTTTCAAATATTTCAGATATCTTTAACATCATTGGGTCAGTTGAAGAATGACGCCATCAGTCAATTGCAAGAATTGGCACTTTCTCTTTCTTTGAAATGTTTATCATTTGATTTTGTGGGAACATCTGTGGATGAAAGTTCTGATGAGTTCGGAACAGTCCAGATTCCATCTCCCTGGAAATCAGTTTTGGAGGATTCTTCAACGTTACAACTATTTTTTGATTACTATGCCATTACAAAGCCCCCTCTTTCGAAGGAGGCACTGGAGTGCTTGGTGCGACTAGCGTCTGTTAGACGTTCCGTGTTTACAAATGATGCTGCCCGTTCTAAGTTTTTGGCCCATTTAATGACAGGAACCAAAGTAATCCTGCAAACAGGGCAAGGTCTTGCAGATCATGATAATTACCATGAGTTTTGTCGTCTTCTTGGTCGGTTCAGAGTCAATTACCAGTTGTCAGAGCTTGTTAATGTGGAAGGCTATAGCGATTGGATACGTTTGGTTGCAGAGTTCACTCTTAAATCTTTGCAGTCATGGCAGTGGGCCAGCAACAGTGTCTACTACCTGTTAGGGTTGTGGTCCAGATTGGTGTCTTCTGTTCCATATTTGAAGGGTGACGCACCAAGCTTACTGGATGAATATGTTCCTAAGATTACTGAAAGTTTCATCACATCAAGATTCAACTCTGTGCAGGCTGGATTACCTGACGATCTTGAGAACCCCTTAGATAATGCTGAACTTCTTCAGGATCAATTAGACTGCTTTCCATATTTATGCAGATTTCAGTATGAAAGCAGTAGTTTATTTATAATAAACATAACAGAGCCTGTCCTGCAAATATACACGGAAAGAGCAAGATTACAGGTTAGTGATAGCAATGATCTCTCTGTGATTGAAGACAAACTTGCTTGGATTGTTCACATCGTTGCAGCAATTCTTAAGATAAAACAATGCACGGGTTGTAGTGCGGAATCTCAGGAAGTGCTAGATGCTGAAATTTCAGCTCGAGTCCTGCAGTTGATCAATGTAACTGACAGTGGAGTACACAGTCAGAGATACAGTGAAATAAGCAAACAACGACTTGATAGAGCAATACTTACTTTTTTTCAGCATTTCAGAAAGTCTTATGTAGGAGATCAAGCAATTCATTCTTCCAAGTTATATGCCCGGTTATCAGAGCTTCTTGGACTGCATGATCATCTATTACTGTTGAATGTTATTGTTGGCAAGATAGCAACTAACCTAAAGTGCTATGCTGAGAGTGAAGAGGTCATTGATCACACCTTAAGTTTGTTCTTGGAGCTTGCATCCGGCTACATGACTGGGAAACTACTTCTGAAGCTGGATACAGTGAAATTTATCGTTGCCAATCATACGAGGGAACATTTTCCATTTTTGGAAGCAAAGAAGTGCTCCCGCAGCAGAACGACTTTCTATTACACTATTGGCTGGTTGATATTCATGGAGGATAGCCTCGTGAAATTTAAATCTTCAATGGATCCACTCCAGCAGGTTTTCCTTAGTTTGGAGTCAACTCCCGATTCAGTTTTTCGAACGGATGCTGTAAAGTCTGCACTTGTTGGTTTGATGAGGGACCTTAGAGGAATCACTATGGCCACAAATAGCCGCCGAACTTATGGCTTTCTATTTGACTGGTTTTATCCTGCACACATGCCTATACTCTTAAAAGGAATCTCACATTGGACAGACAACCCAGAGGTCACGACCCCATTGTTGAAGTTCATGGCTGAGTTTGTGCTAAATAAAGCTCAACGTTTGACATTTGACTCTTCTTCTCCAAATGGAATACTTCTCTTCAGGGAAGTCAGTAAACTGATTGTCGCTTATGGATCTAGAATTTTGACTCTTCCAAATACTGCTGATGTATATACGTACAAGTACAAAGGAATATGGATCTGTTTAACAATACTGTCAAGAGCCCTTGCAGGAAACTATGTCAACTTTGGTGTGTTTGAATTGTATGGTGACAGAGCTCTATCTGATGCACTTGATGCTGCTTTGAAGATGACACTGTCAATTCCCATGTCTGATATATTGGCTTATCGAAAGCTAACAAGGGCGTATTTTGCATTCTTGGAAGTTTTGTTCAACAGCCACATCACTTTCATATTGAGCTTGGACACAAACACCTTTATGCATATAGTTGGCTCCCTCGAATCTGGTCTAAAAGGCTTGGATACAAATATATCATCACAGTGTGCATCTTCTGTTGATAATTTGGCTGCTTTCTATTTTAACAACATCACTATGGGAGAGGCTCCAAATTTACCTGCAGCTGTCAATCTTGCCCGTCATATTGCAGAATGTCCCACTCTGTTCCCAGAAGTTTTGAAGACTCTGTTTGAGATCTTATTGTTTGAAGATTGTGGCAACCAATGGAGTCTGAGCAGGCCAATGTTGAGCTTGATACTCATAAATGAGAAGACATTCTCTGATTTGAAAGCTCAAATCTTGTCATCACAGCCAATGGATCACCATCAACGGCTCTCTCTATGTTTTGATAAACTTATGGCAGACGTTACTCTAAGCTTAGACTCAAAAAACAGGGATAAGTTTACTCAAAACCTCACCATATTTCGGCATGATTTCCGTGGCAAATAA 3150 0.4076 MELAQLEALCERLYNSQDSVERAHAENTLKCFSMNTEYISQCQYILDHALTPYALMLASSSLLKQVTEHSLALKLRLDIWAYLLNYLATRGPELQPFVTASLIQLLCRVTKFGWFDDDRFRDLVKESMNFLSQATPGHYAIGLKMLNQLISEMNQANAGLPATKHRRVACSFRDQSLFQIFQISLTSLGQLKNDAISQLQELALSLSLKCLSFDFVGTSVDESSDEFGTVQIPSPWKSVLEDSSTLQLFFDYYAITKPPLSKEALECLVRLASVRRSVFTNDAARSKFLAHLMTGTKVILQTGQGLADHDNYHEFCRLLGRFRVNYQLSELVNVEGYSDWIRLVAEFTLKSLQSWQWASNSVYYLLGLWSRLVSSVPYLKGDAPSLLDEYVPKITESFITSRFNSVQAGLPDDLENPLDNAELLQDQLDCFPYLCRFQYESSSLFIINITEPVLQIYTERARLQVSDSNDLSVIEDKLAWIVHIVAAILKIKQCTGCSAESQEVLDAEISARVLQLINVTDSGVHSQRYSEISKQRLDRAILTFFQHFRKSYVGDQAIHSSKLYARLSELLGLHDHLLLLNVIVGKIATNLKCYAESEEVIDHTLSLFLELASGYMTGKLLLKLDTVKFIVANHTREHFPFLEAKKCSRSRTTFYYTIGWLIFMEDSLVKFKSSMDPLQQVFLSLESTPDSVFRTDAVKSALVGLMRDLRGITMATNSRRTYGFLFDWFYPAHMPILLKGISHWTDNPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRILTLPNTADVYTYKYKGIWICLTILSRALAGNYVNFGVFELYGDRALSDALDAALKMTLSIPMSDILAYRKLTRAYFAFLEVLFNSHITFILSLDTNTFMHIVGSLESGLKGLDTNISSQCASSVDNLAAFYFNNITMGEAPNLPAAVNLARHIAECPTLFPEVLKTLFEILLFEDCGNQWSLSRPMLSLILINEKTFSDLKAQILSSQPMDHHQRLSLCFDKLMADVTLSLDSKNRDKFTQNLTIFRHDFRGK 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05968 1049 FunFam ARM repeat superfamily protein 833 1048 - -
Trre5g05968 1049 Coils Coil 3 23 - -
Trre5g05968 1049 PANTHER EXPORTIN 4,7-RELATED 2 1047 IPR044189 GO:0005049|GO:0051169
Trre5g05968 1049 FunFam ARM repeat superfamily protein 1 528 - -
Trre5g05968 1049 Gene3D - 830 1048 IPR011989 -
Trre5g05968 1049 SUPERFAMILY ARM repeat 1 969 IPR016024 -
Trre5g05968 1049 Gene3D - 1 547 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05968 Trre-Chr5 59023362 59039017 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05968 K18460 - gmx:100804346 1932.53