Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05941 ATGGCTGCTGCTGCGCAAGAACAACCCATTTCCAACATCCTCATCGTCATTGCTATGCAGACGGAGGCTCAACCTGTTGTCAATAAATTTGAGCTCGTCGAAGATCCGAGCTCTCCGTTTCCGCAAGGCGTTCCTTGGGTACGTTATCATGGGAAATACAAAGATCTCAATATAAACTTGATTTGGCCTGGAAAAGATCCATCTTCTGGGGTTGATAGTGTCGGCACAATATCGTCTGCTCTTGTAACATATGCTGCTATTCAAGCATTGCAGCCTGACTTGATCATAAATGCAGGCACTGCTGGGGGCTTCAAGGCCAGAGGAGCTAGTGTTGGTGACATTTTCATTGCATCAGATTGTGCTTTTCATGACAGAAGAATACCTATTCCTGTTTTTGATCTGTATGGAGTTGGCTCACGTAAAGCCTTTGAAACACCCAACCTTGTAAAGGAACTTGATCTAAAGGTGGCTAAATTGTCTACTGGTGACTCTCTAGATATGACAGAGCAGGATGAATTATCAATCACGGCAAATGATGCAACTGTTAAAGATATGGAGGGAGCAGCTGTTGCTTACGTTGCCGACCTTTTGAAAGTTCCTGCAATTTTTGTAAAAGCTGTGACTGATATCATCGATGGTGACAAACCAACTGCTGAAGAATTCCTGCAGAATTTGGCTGCTGTAACAGCTGCACTTGATCTGGCTGTCGAAAAGGTCGTTAATTTTATTAATGGGAAGAGCATATCTGAACTTTGA 756 0.4339 MAAAAQEQPISNILIVIAMQTEAQPVVNKFELVEDPSSPFPQGVPWVRYHGKYKDLNINLIWPGKDPSSGVDSVGTISSALVTYAAIQALQPDLIINAGTAGGFKARGASVGDIFIASDCAFHDRRIPIPVFDLYGVGSRKAFETPNLVKELDLKVAKLSTGDSLDMTEQDELSITANDATVKDMEGAAVAYVADLLKVPAIFVKAVTDIIDGDKPTAEEFLQNLAAVTAALDLAVEKVVNFINGKSISEL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05941 251 PANTHER 5'-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE 1 3 251 IPR044580 GO:0008930|GO:0019509
Trre5g05941 251 Gene3D Nucleoside phosphorylase domain 1 251 IPR035994 GO:0003824|GO:0009116
Trre5g05941 251 Pfam Phosphorylase superfamily 13 239 IPR000845 GO:0003824|GO:0009116
Trre5g05941 251 CDD MTAN 13 231 - -
Trre5g05941 251 SUPERFAMILY Purine and uridine phosphorylases 6 228 IPR035994 GO:0003824|GO:0009116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05941 Trre-Chr5 58866652 58870747 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05941 K01244 - gmx:100800253 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05941 5 58866652 58870747 Trre5g05941 5 58866652 58870747 ECH