Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05922 ATGGCGAGTGGTGCTGCTAGTGCGATGCAGCGGTGCACCGTTGCTGCAAGGTGGTTAATAAGAGGTGCGTCGTCGGAGACACCTTCTGTTTCTTCCGGCGTAGCAGCTCCGATATTATGCGGGCGTGGTGATAAAAAGACAAAGAAAGGGAAGAGATTCAAGGGATCATACGGGAAATCTCGTCCGAAGAGAGAACAAATGATCGAGCGCATGAAAGATAAGGTTGAAGTTCCCAGGTCTACTCCTTGGCCTCTTCCTTTCAAGCTCATTTGA 273 0.4982 MASGAASAMQRCTVAARWLIRGASSETPSVSSGVAAPILCGRGDKKTKKGKRFKGSYGKSRPKREQMIERMKDKVEVPRSTPWPLPFKLI 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05922 90 Pfam Ribosomal protein S31e 29 82 IPR030826 GO:0005840
Trre5g05922 90 PANTHER 30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC 12 90 IPR044695 -
Trre5g05922 90 MobiDBLite consensus disorder prediction 26 64 - -
Trre5g05922 90 NCBIfam 30S ribosomal protein THX 41 64 IPR030826 GO:0005840
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05922 Trre-Chr5 58734986 58735258 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05922 K19033 - gmx:113001441 117.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05922 5 58734986 58735258 Trre5g05922 5 58734986 58735258 ECH