Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05919 ATGAGCCTAACTTCGACGGCAGCGTACGTTGCTCGGCGAGCGGCGCAGAAGGAGAAGGTTCGGATTCTTTACCGCCGCGCCCTCAAAGACACTCTCAACTGGGCCGTACATCGCCACCTCTTCTACGACGACGCTTCAAATCTTCGTGATAGATTCGAGCAAAACAAACACGTGGAAGATCCTGATACCATTGATAGGTTGATAGCTGATGCTGAAGCTAGCTACAATAAGTGGCGCCATCCTGATCCTTATATAGTTCCATGGGCACCTGGTGGTTCCAAGTTTACTCGCAACCCACCTCCACCTGAAGGGATTGAGATAATTTATGACTATGGCCGTGAAGACAACGACTAA 354 0.5 MSLTSTAAYVARRAAQKEKVRILYRRALKDTLNWAVHRHLFYDDASNLRDRFEQNKHVEDPDTIDRLIADAEASYNKWRHPDPYIVPWAPGGSKFTRNPPPPEGIEIIYDYGREDND 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05919 117 CDD Complex1_LYR_NDUFB9_LYRM3 16 92 IPR045292 -
Trre5g05919 117 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE B22 SUBUNIT 5 113 IPR033034 GO:0006120
Trre5g05919 117 Pfam Complex 1 protein (LYR family) 20 72 IPR008011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05919 Trre-Chr5 58714921 58719001 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05919 K03965 - gmx:100305723 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05919 5 58714921 58719001 Trre5g05919 5 58714921 58719001 ECH