Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05907 ATGGCGTTGTACAAACGTGCTTTTGGGTTCACAATCACCAATTGCAGCAGTCACATCATTTCTTCTTCTACTACTACTACTACCAGACATGTTTCACAGGCCGTCGATTCCAACGTTAAGCGCGCATTCCTCGTCGATACACTTCAACTCGTACGGAATTTAGAATCGAATGGTTTCCCTTCCAAACAAGCAGAAGCGATTACTTCCGCAATCACTGAAGTTCTAAATGATAGTTTGGAAAATGTTGCTCAATCTTTTGTTTCAAAATCCGATATGCAAAAGTCAGAGATGATTCAAGAAACAAATCTCTCAAAGTTCAAATCTGAAGTTCAAAGTTCTCAGGAGCATCATTTTTCTTTGTTGCAACGCGAGACTGAAAAGCTCCGTAATGACATAGATAAGATGAGAAGTGAATTGAGGTATGAGATTGACAAAGTCACTGCTGGGCAACGATTGGACTTGAATCTTGAAAGAGGACGCATTAAGGATGAGCTTGCTGATCAAAATGCTGAAACCACCAATTTGACAAACAAACTTGATCGGGAAATCCATGCATTGAGAGCCCAATTAGAAGCTGCAAAGTATGATGTGATCAAATACTGCATAGGTGCCCTTGTCTCTATATCAGCGGTGGGTCTCGCTGTGATCCGCATCATATTGTAG 663 0.4103 MALYKRAFGFTITNCSSHIISSSTTTTTRHVSQAVDSNVKRAFLVDTLQLVRNLESNGFPSKQAEAITSAITEVLNDSLENVAQSFVSKSDMQKSEMIQETNLSKFKSEVQSSQEHHFSLLQRETEKLRNDIDKMRSELRYEIDKVTAGQRLDLNLERGRIKDELADQNAETTNLTNKLDREIHALRAQLEAAKYDVIKYCIGALVSISAVGLAVIRIIL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05907 220 PANTHER UNCHARACTERIZED 23 219 IPR024461 -
Trre5g05907 220 FunFam Coiled-coil domain-containing protein 90-like 46 146 - -
Trre5g05907 220 Coils Coil 118 138 - -
Trre5g05907 220 Gene3D - 46 147 - -
Trre5g05907 220 Pfam Coiled-coil domain-containing protein 90-like 45 218 IPR024461 -
Trre5g05907 220 Coils Coil 162 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05907 Trre-Chr5 58656334 58660249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05907 - - rcu:8284365 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05907 5 58656334 58660249 Trre5g05907 5 58656334 58660249 ECH