Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05878 ATGGGTTCAAGTTCAATCAAGTTGTATAAACTCAAATCAGAGAAATCCAACAAAGTTCAAAAACATCGTCAGCTACGAAAGATTGCAAATTTGTTGAGGTATGTAGAGATGTGTGTTGTGTTGGTTTTGATTTCAAGGGTTTCATTTCAACAACTACCATTAGCTTTGAAGATCTCGAGCGAGTATTTTCGCGGTTTCACAGTTAGTCCTCGGTTTGTTTTTCTTGTTGGAAACATCATCATCATCACACTCTTTGCTCAATCTGGTCATTTTTCATCTCATGATTCTGCAAAAAGAAGAAGTGCAGAAGATGAACTGTATCTCGAGTTTCTTAAGAACAGCAGCATGTATCAGAGAGTCCAAGGTTTTGAACAGAAAAAATTGAGCATAAAAATGGAGAATAACAAAAAAGGTCGTAGAATCAATGATCGTTGCATGGTGAAATTCTCTGAGAAAGAGTGTGAAAAAAGTGGTGATGATGATAAGAGAATGAAGTTGGAAGAGAAACAGAGGATATTAAAAACAGAGTGTTGCAAAGATATGGAAGTGAAGGAATATAGGAGGTGTCAATCGGAAATTACGATGGTGAGGGGTGTGAATAGTGATGATGAGAAGGAACAAAAAGTTCTGCAAAGGTGTGAGAGTGAGAATGATGAAAGAAAGAGGAGAAACATTGAATTTGATAAACAGAAAATGATGGAAAAAAATTCTTGTTTATATCCTGAAGATGGAATGAGCAATGATGAATTTCGTCAAACTGTTGAGGCATTCATTGCACGACAACAGAAGCTACGAACAAACGCAATACAAAGCATTTATTCCTAG 825 0.3624 MGSSSIKLYKLKSEKSNKVQKHRQLRKIANLLRYVEMCVVLVLISRVSFQQLPLALKISSEYFRGFTVSPRFVFLVGNIIIITLFAQSGHFSSHDSAKRRSAEDELYLEFLKNSSMYQRVQGFEQKKLSIKMENNKKGRRINDRCMVKFSEKECEKSGDDDKRMKLEEKQRILKTECCKDMEVKEYRRCQSEITMVRGVNSDDEKEQKVLQRCESENDERKRRNIEFDKQKMMEKNSCLYPEDGMSNDEFRQTVEAFIARQQKLRTNAIQSIYS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05878 274 PANTHER TRANSMEMBRANE PROTEIN 10 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05878 Trre-Chr5 58430968 58431792 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05878 - - tpra:123899207 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05878 5 58430968 58431792 Trre5g05878 5 58430968 58431792 ECH
Trre5g05878 5 58430968 58431792 Trre15g04095 15 51483096 51483812 ECH