Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05867 ATGGAGACGGTGATGGAAGATGTTGAAGAATACAACTACAGAGAAGTGAAACTTCCATCTCTGATTCCAATAGTACCTGAGCCAGAGCTTGAAAGAGAATCAGGAGAAAGGAGAAGAGGAAGAGATATAATTGTAGCCATAGATCATGGTCCAAACAGTAAATATGCTTTTGATTGGGCTCTTATTCATCTATGCAGACTTGCTGATACCATCCATCTTGTTCATGCTGTTTCTGATGTGAAGAACCAAGTTGTGTACGACTTGACTCAGGGGCTGATGGAGAAATTAGCTGTTGAGGCTTTTGAAGTTGCAATGGTGAAAACAGTAGCTCGGATTGTGGAAGGTGATGCAGGAAAAGTAATTTGCAAGGAAGCAGAGAGGACTAAACCTGCAGCTGTGGTTTTGGGGACCAGAGGCAGAAGCTTGTTTCAAAGTGTGCTACAAGGAAGTGTTGGTGAGTATTGCTTTCATCACTGTAAAGCAGCACCTGTTGTCATTGTTCCTGGAAAAGATGCTGGTGATACATCAATCGTCTAA 537 0.4246 METVMEDVEEYNYREVKLPSLIPIVPEPELERESGERRRGRDIIVAIDHGPNSKYAFDWALIHLCRLADTIHLVHAVSDVKNQVVYDLTQGLMEKLAVEAFEVAMVKTVARIVEGDAGKVICKEAERTKPAAVVLGTRGRSLFQSVLQGSVGEYCFHHCKAAPVVIVPGKDAGDTSIV 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05867 178 Pfam Universal stress protein family 41 168 IPR006016 -
Trre5g05867 178 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 41 170 - -
Trre5g05867 178 CDD USP_Like 43 167 - -
Trre5g05867 178 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 177 - -
Trre5g05867 178 Gene3D - 3 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05867 Trre-Chr5 58366173 58368026 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05867 - - gmx:100306377 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05867 5 58366173 58368026 Trre5g05867 5 58366173 58368026 ECH