Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05853 ATGGCCATAAACATTGTATCTTGGATGCTTCTTCATCTACTAGTAATCATGCTGTGTTCTCATGGATTCCAAGCAAGGGAATTGGTTGAAACAGAAAACAAATCATTGGAAATTCATCACAACCATCATCATAATCATATGACTCATAATATTGATCCTTCACTAATGGTGTTTTTTACTTTGAAAGATTTGAAAGTAGGAAAAAAAATGCAAATTTATTTTCCTAAAAGAGACCCATCAACTTCACCTAAGTTATGGCCCAAAGAAGAAGCTGAATCACTTCCTTTCTCATCAAACCAACTTTCATATCTTCTCAAATTCTTCTCTTTTTCTACAAACACTCCACAAGCTATGGCTATGGAAAACACCTTAAAGGAATGTGAGAGTAAACCCATTAAAGGAGAAGTTAAGTTTTGTGCTACCTCATTAGAATCTATGCTTGAATTCACACAAAATGTTCTTGGTTCAAAATCTGAAATCCAAGTTTATGCAACTTTGCACAAAACAAAATCAAGTGTTACTTTTCAAAATTACACTATTGTAGAAATTTTGATGGAAATTCTAGCTCCAAAAATTGTAGCTTGTCACACTATGCCTTACCCTCATGCTGTTTTTTATTGTCATAGTCAAGAAAGTGAGAATAGGGTGTATAAAGTTTTATTGGGGGGTGAGAATGGAGATAAGGTTGAAGCTATGGTGGTTTGTCACATGGATACATCACAATGGGCACCTAGTCATGTTTCATTTCAAGTTCTTGGTGTTACACCAGGAAGCTCTTCTGTGTGCCACTTTTTTCCAGCAGATAATTACATTTGGGTTCCTAAATTGAAATCACAAGGTTCTTCTAGCATGTGA 855 0.3497 MAINIVSWMLLHLLVIMLCSHGFQARELVETENKSLEIHHNHHHNHMTHNIDPSLMVFFTLKDLKVGKKMQIYFPKRDPSTSPKLWPKEEAESLPFSSNQLSYLLKFFSFSTNTPQAMAMENTLKECESKPIKGEVKFCATSLESMLEFTQNVLGSKSEIQVYATLHKTKSSVTFQNYTIVEILMEILAPKIVACHTMPYPHAVFYCHSQESENRVYKVLLGGENGDKVEAMVVCHMDTSQWAPSHVSFQVLGVTPGSSSVCHFFPADNYIWVPKLKSQGSSSM 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05853 284 SMART BURP_2 56 275 IPR004873 -
Trre5g05853 284 ProSiteProfiles BURP domain profile. 58 275 IPR004873 -
Trre5g05853 284 Pfam BURP domain 57 274 IPR004873 -
Trre5g05853 284 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 38 274 IPR044816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05853 Trre-Chr5 58205502 58206447 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05853 - - tpra:123899233 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05853 5 58205502 58206447 Trre5g05853 5 58205502 58206447 ECH